Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq45 122 9e-23 seq21 111 2e-19 >seq45 Length=386842 Score = 122 bits (134), Expect = 9e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 || || | |||||| |||| || |||||| ||||| ||||| || ||||| || Sbjct 237903 AACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGT 237962 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 |||| ||||||||||||||||| || ||||||||||||||||| | || | || ||| Sbjct 237963 CCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCC 238022 Query 42111 TTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 42169 |||| | ||| |||| | || | | | | |||||| ||||| || || | || Sbjct 238023 TTGT-CTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGT 238081 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || || || ||||| || ||||||||||| Sbjct 238082 GATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || || |||||||| ||| || || | Sbjct 237677 ACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACC 237736 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||||||||||||||| ||||| ||||||||||| | || | | ||||| Sbjct 237737 ATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTT 237796 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 ||| ||| || || | ||| | | | ||||| ||||| || || | |||| Sbjct 237797 GTCTTGGATCTTGCTCTTCA-CGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGA 237855 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||||||| | ||||| || ||||| ||||| Sbjct 237856 TGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || || || || |||| || || ||||| || ||||| Sbjct 238158 TCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 238217 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||||||||||| || | || || |||||| ||| || |||| | Sbjct 238218 ATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTCGACTTGACATTG 238277 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||| || ||||| |||| |||||||| || || ||||| ||||| ||| Sbjct 238278 TCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGTTAGGGTCTTGACA 238337 Query 42198 A 42198 | Sbjct 238338 A 238338 >seq21 Length=742638 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||| | || | ||||||||||| || || ||||| || | || || || | Sbjct 188084 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCC 188025 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| || || ||||||||||| | || | | |||||| Sbjct 188024 ATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTT 187965 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| || |||| | | | |||||||| || ||||| |||| ||||| Sbjct 187964 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGAT 187905 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || ||||| || || || ||||| Sbjct 187904 AGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 187869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212093823360