Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq45 114 9e-21 >seq45 Length=386842 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| ||||| | | || || || || ||||| || || || |||||||| ||||| Sbjct 237894 CCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTT 237953 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| |||| |||| || || ||||| | || | ||||| ||||| || Sbjct 237954 AGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGG 238013 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||||||| || ||| | || || || || ||| || Sbjct 238014 ATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACC 238073 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| ||||| || || || ||||| || || || ||||||||| Sbjct 238074 TCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCATA 238121 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || |||||||| || || || |||||||||||||| || | | | || || Sbjct 237684 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCC 237743 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || |||||| | || | |||||| ||||| ||||| ||||||||||| Sbjct 237744 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGG 237803 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||||| || || | || || || || |||||| || || || ||||| || Sbjct 237804 ATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCTTG 237863 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| || || || || || |||||| Sbjct 237864 CCCGTCAATGTCTTGACGAAGATCTGCATA 237893 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || ||||| |||||||| |||||||| ||| ||||||| | ||| Sbjct 238146 TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCGAGTTGC 238205 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | ||||||||||| |||||| || || ||||| ||||| || || Sbjct 238206 TTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTC 238265 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || ||||| ||| || || || | ||| ||||| || || || Sbjct 238266 GACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGTT 238325 Query 15154 AGAGTTTTTACAA 15166 || || || |||| Sbjct 238326 AGGGTCTTGACAA 238338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391547005640