Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq84 120 4e-22 seq28 102 1e-16 >seq84 Length=125178 Score = 120 bits (132), Expect = 4e-22 Identities = 284/420 (68%), Gaps = 13/420 (3%) Strand=Plus/Minus Query 12694 TGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGT 12753 |||| | || ||||| || || || || | || || | || |||||||| | | | Sbjct 36675 TGATATGTCGGTCAAAACGGCCAGGTCGCATTAGAGCCTTATCGAGGATATCTACTCTAT 36616 Query 12754 TCGTCGCCGCGATGACAACGAT--GCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAA 12811 | || | |||| |||||||| || || |||| || ||| ||||||||||| || | Sbjct 36615 TAGTACCAGCGAGAACAACGATCTGCTCGG-TCGT-ATTGAAACCATCCATCTCCGTAAG 36558 Query 12812 GAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGG-GCATACC--ACCCGCACTGCG 12868 | ||| |||| ||| || |||||||| || || | || | || | ||| || Sbjct 36557 AATTTGGTTGAGGGTAGCCTCTCGTTCATCGTTGCCGCCGAATCTCTGACTCTCACCACG 36498 Query 12869 TTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGC 12928 | |||| |||||| ||||| || || |||| ||| || || ||| | ||| || Sbjct 36497 CGATCTGCCGATGGCGTCGATTTCATCGATAAAAATGATGCATGGCGCATTCTTACGCGC 36438 Query 12929 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 | | || | || ||||||||| |||||| ||||| ||||||||||||||||| | Sbjct 36437 ATTAGCGAAAAGGTCGCGCACTCTCGAGGCACCTACACCGACAAACATCTCCACAAATTC 36378 Query 12989 GGCGGCG-GAACATTGG--ATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAG 13045 || | || || || | |||||| || || || || || | ||| ||||| Sbjct 36377 GGAGCCGCTGAC---GGAAAAGAAGGGCACACCAGACTCGCCGGCAGTAGCTTTTGCGAG 36321 Query 13046 GAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 || ||||| || || || ||| || || |||| |||||||| |||||| ||||||| Sbjct 36320 TAGAGTCTTACCGGTACCGGGTGGGCCGGCAAGAATAGCACCACGAGGGATCTTGGCACC 36261 >seq28 Length=668342 Score = 102 bits (112), Expect = 1e-16 Identities = 114/151 (75%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 ||||| ||||||||||| |||||||| ||||| ||||| |||||| ||||| ||||| Sbjct 583798 TGGAGGCCCTCGTCACGCGAGATGAGCTCATTGGAGAAAGTCAGACCGGGCATCAGACCA 583739 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 |||||||| | ||||||||| | || | ||| ||||||||| || || || Sbjct 583738 CGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCACTGAAGAAGATACCTTCAACGGCG 583679 Query 127652 GCGAACGCAAATAGACGCTCGGC-AAAGGAG 127681 ||||| |||| ||||| | ||| |||| || Sbjct 583678 GCGAAGGCAATGAGACGTTGGGCGAAAGTAG 583648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506402440640