Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq10 120 5e-22 seq28 107 3e-18 >seq10 Length=1111123 Score = 120 bits (132), Expect = 5e-22 Identities = 448/690 (65%), Gaps = 27/690 (4%) Strand=Plus/Plus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGC-TTCTCAGATAGTACA 203894 ||||| || || |||||||| || | ||| | | |||| | || ||| || ||||||| Sbjct 723190 TCTTGGTCAACAGTGAACTGGATAG-GTTGAGCAGCAG-CTTGTGTTCGTAGGTAGTACA 723247 Query 203895 TGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGT 203954 |||| ||||| || || || |||||| | ||||||| || | |||| || Sbjct 723248 TGCCAGTCTTAAGACCGAGCTTCCACCCAGTGAAGTGCATGCTAGTGATCTTGCCCATTG 723307 Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTG 204014 |||| || ||||||||| || || ||||| ||||| ||||||| | || || | Sbjct 723308 TGGGTTCCCTCATGTGAATATTGAGTGACTGTGACTGGTCAATGAAAGCACCACGGTCAG 723367 Query 204015 CGGCCATATTGATAA-TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTC---- 204069 ||||||| | || || || || | || || || |||||||| |||||| ||| | | Sbjct 723368 CGGCCATTTGGACAACTGTTCGT-TGGGAGATTTCCCACACAGTCTTGTACAAGGCCTTG 723426 Query 204070 ---TCTGGTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAG 204126 || | || | || | || || | ||||| || || || || | Sbjct 723427 ACCTCCGCTGGGATGCTGGGTATATTTTGA-------ATCGAACCACCCTCAGCGATAAT 723479 Query 204127 TCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGG 204186 | || || | | || ||| |||||||| || ||| ||| || || ||| Sbjct 723480 GCGATTCTTCATATTGTCAGACCAGATGCCCAAATCGACCAGGTCCTTCAGTAGCCAGGG 723539 Query 204187 GTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGG 204246 ||||| | || || || |||| ||| || | || | | | | || |||| | || Sbjct 723540 GTTGACAACTTGGAATTCGCCGGCCAGGACACGACGAGAGTAAATATTCGAGGTGTAAGG 723599 Query 204247 TTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAG 204306 ||||| ||||||||||| | |||||| | ||| ||||| || ||||| ||||||| Sbjct 723600 CTCGAAGCATTCGTTGTTGCCCAGAATCTGCGAGGTACTGGCAGTTGGCATAGGAGCCAT 723659 Query 204307 GAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGT 204365 ||| || |||||| ||||||| || | || ||| ||| |||| | |||||| Sbjct 723660 GAGGAGACTGTTGCGTACACCGTTTTGCTTGA-TTTGCTCCTTGAGAGTAGCCCAGTC-- 723716 Query 204366 GCATCGCACTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGG 204423 || | ||| || | || |||||||||| |||||| ||||| ||| ||| || Sbjct 723717 CCAAAGGTCTGACGGAGTAACATTCCACATGTCGTACTGAAGAATGCCCTGAGAGACAGG 723776 Query 204424 GCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCAT 204483 ||||| ||| || | || | || |||| || |||| || || | || Sbjct 723777 AGAGCCCTCGTAAGTAGAGTAGGTGCCTTCTTCTTTGGCAAGCTCCATTGATGCAGTCAA 723836 Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTG 204513 || | |||||| |||||||||||||| Sbjct 723837 AGCAGCGTGGTACATTGTCTCAAAGATCTG 723866 >seq28 Length=668342 Score = 107 bits (118), Expect = 3e-18 Identities = 159/224 (71%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGA 159972 ||||| ||||| ||||| || || || |||||||| || ||||||| ||| ||||| Sbjct 583823 AAACAATAGGCAGGCAAAATCAGTATGGAGGCCCTCGTCACGCGAGATGAGCTCATTGGA 583764 Query 159973 CATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACC 160032 | | || || ||||| | |||||| |||||||| ||||||| || |||||||| Sbjct 583763 GAAAGTCAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACC 583704 Query 160033 GCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTT 160092 || || ||||| || || ||||| || || || | ||| | | | |||| | ||| Sbjct 583703 ACTGAAGAAGATACCTTCAACGGCGGCGAAGGCAATGAGACGTTGGGCGAAAGTAGAGTT 583644 Query 160093 GGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGA 160136 | ||| | ||||| | ||||| ||||||||| |||||| Sbjct 583643 GCGGTCGGTGATCCACTTCAGAGCCCAGTCAGCCTTC-TTGCGA 583601 Score = 89.7 bits (98), Expect = 8e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 160328 CCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTG 160387 ||||||| ||| ||||||||||| | | ||| ||||| || | | ||||||| | |||| Sbjct 583354 CCGTCGGAGGCAGCAAAGAAAGCTAGGATGTGGGAGATAAAGTATTTCTCGTCCTCGTTG 583295 Query 160388 AGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATT 160446 | ||| || | ||||| ||| || ||| | || |||||||| ||| || ||| |||| Sbjct 583294 ATTCTATTGTTCCAGTCGTG-CAGGTCCTTGGACAAATCAATCTCCTCAGCGGTCCAGAA 583236 Query 160447 GGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 || |||| || | |||||||| |||||| Sbjct 583235 GGAGGCCTCGGCTTTCTTGTACATTTGCCAGAT 583203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154166298240