Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq45 145 2e-29 seq21 127 5e-24 seq25 113 1e-19 >seq45 Length=386842 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | |||||| || |||||||| |||| |||||| || || || Sbjct 237672 CGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTG 237731 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| || ||||||||||||||||||||||| ||| ||| ||| Sbjct 237732 CGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCT 237791 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||||||| || | |||||||| | |||||| ||||| Sbjct 237792 TCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAAT 237851 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| | || || || || || || Sbjct 237852 GTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTG 237889 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| | |||||| || |||||| |||| ||||||||| | ||| || Sbjct 238411 CGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTG 238470 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || |||||||||||||| || | || |||||||| ||| ||| ||| Sbjct 238471 CGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCT 238530 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| ||| || | | || || ||||| Sbjct 238531 TCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAAG 238590 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| |||||||| || || || || || Sbjct 238591 GTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTG 238628 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| || | ||||||||| | ||| | ||| || Sbjct 237909 AGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCC 237968 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||| ||||||||||| ||| || ||||| || Sbjct 237969 TCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 238028 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || |||||| |||| ||||||| || ||| || ||||| ||||| ||| Sbjct 238029 TGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTC 238088 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 238089 TTTCCGGTAAGAGTCTTGACGAAGATTTG 238117 Score = 123 bits (136), Expect = 6e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||||||||||||| || |||||||||| ||||||||| | || Sbjct 238128 CGAAGGCGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTT 238187 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || ||||| ||||||||||| | |||||||||||| ||| || ||| Sbjct 238188 CGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCT 238247 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| ||||| ||| || || | ||||| | | || || || | Sbjct 238248 TCTTTGTCCTGGATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAGG 238307 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||||| ||||| || || || || || |||| Sbjct 238308 GTGATGGTCTTTCCAGTTAGGGTCTTGACAA 238338 >seq21 Length=742638 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || |||||| |||| ||||||||| | | || Sbjct 188089 CGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 188030 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| ||||||||||| |||||||||||||| || ||||| Sbjct 188029 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCC 187970 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | || || || | Sbjct 187969 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGG 187910 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||||||||| || || || ||||| || Sbjct 187909 GTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTG 187872 >seq25 Length=698551 Score = 113 bits (124), Expect = 1e-19 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | || ||||| ||||||||||||||||||| Sbjct 513822 CCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGA 513763 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 ||||||||||||| ||||| || || || ||||| ||||| ||| || | Sbjct 513762 TGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 513703 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| |||||||| || ||||| | Sbjct 513702 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 513643 Query 199620 AAATTTG 199626 | || || Sbjct 513642 AGATCTG 513636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920029086968