Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq21 141 1e-28 seq45 120 3e-22 >seq21 Length=742638 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||||| ||||| ||||||||||| || || || | Sbjct 188084 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCC 188025 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||||||||| |||| ||||||||||| | || | | |||||| Sbjct 188024 ATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTT 187965 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | |||||||| || ||||| || | ||||| Sbjct 187964 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGAT 187905 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| || || || || || || ||||| Sbjct 187904 AGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 187869 >seq45 Length=386842 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||| || || || |||| ||||| |||||||||||||| Sbjct 238158 TCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 238217 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||||| || | || || |||||| ||||||| ||||| | Sbjct 238218 ATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTCGACTTGACATTG 238277 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || ||||| || | |||||||| || || || || || || ||| Sbjct 238278 TCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGTTAGGGTCTTGACA 238337 Query 46583 A 46583 | Sbjct 238338 A 238338 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| |||| || | || |||||||| ||||| |||||||||| Sbjct 238403 TGCCACCGCGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGG 238462 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | | ||||| | || || || ||||| |||||||| |||||||| |||||||| | | Sbjct 238463 ACAAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAG 238522 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||||| | | | || ||| || |||| Sbjct 238523 GAATACCTTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCA 238582 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| ||||| || || || || || || || || ||||| ||||| Sbjct 238583 CCTCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 Score = 107 bits (118), Expect = 2e-18 Identities = 167/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || | | ||| | ||||| || | ||| |||||| ||||| |||| Sbjct 237658 ATTACTGGCCGCCACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGT 237717 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 | ||| || ||||| | || || |||||||| || ||||| || | |||||||||| Sbjct 237718 AATCGCTCAGGGTGCGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGT 237777 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTC 46537 | | || | | |||||||| |||||| |||| | ||| | | | ||||| Sbjct 237778 CAGGAGGAATACCTTCCTTGTCTTGGATCTTGCTCTTCA-CGTTGTCAATGGTGTCTGAG 237836 Query 46538 GATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || |||| |||||||| |||||||||| || || || ||||| ||||| Sbjct 237837 GATTCTACTTCCAATGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 105 bits (116), Expect = 8e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435 || || | ||||| |||| ||| |||||| || || ||||||||| |||||| || Sbjct 237903 AACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGT 237962 Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495 |||| || |||||||| || || || || | ||||||||||| | || | || ||| Sbjct 237963 CCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCC 238022 Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 ||||| || || |||| | | | | |||||| ||||| || |||| ||| Sbjct 238023 TTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTG 238082 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || || || ||||||||||| Sbjct 238083 ATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237665190080