Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq28 131 2e-25 seq21 129 6e-25 seq45 127 2e-24 seq25 127 2e-24 >seq28 Length=668342 Score = 131 bits (144), Expect = 2e-25 Identities = 298/440 (68%), Gaps = 10/440 (2%) Strand=Plus/Minus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAG 132722 ||||||||| ||||| || | | | |||| |||| |||| | || |||| || Sbjct 584042 CATAAAATCGAAGGGATTAGTCGAGCGGTAGACCTTGTCATTGCCTAA-AG--CGACAAG 583986 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 || | ||||| |||||||||||||| ||| |||| | || || || | || |||| Sbjct 583985 CAAACGATCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGC-GTTCATCCCGAGCA 583927 Query 132782 GACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840 || |||| ||||| ||||| || ||||| |||||| || || || ||| | | Sbjct 583926 GA-GCACAAGGCAGGGCTTCTGTCAGAAATTCTTGCTCAATCTTAACAGCATCGACTATG 583868 Query 132841 ATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900 | | || ||| | || ||| ||||| | | ||| || |||| | ||| ||| Sbjct 583867 ACTGCCTCTACGAGTTCCTTGCTGGGCCGATTCTTCAAGTGAGAAAACAATAGGCAGGCA 583808 Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960 || || ||| | ||||||||| | || ||||| || ||| |||||||| |||||| Sbjct 583807 AAATCAGTATGGAGGCCCTCGTCACGCGAGATGAGCTCATTGGAGAAAGTCAGACCGGGC 583748 Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020 || || || || || |||||||| || |||| ||||||| || ||||||| || Sbjct 583747 ATCAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCACTGAAGAAGATACCT 583688 Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080 || ||||| ||||| || | || || | | |||| || | | | || |||||| Sbjct 583687 TCAACGGCGGCGAAGGCAATGAGACGTTGGGCGAAAGTAGAGTTGCGGTCGGTGATCCAC 583628 Query 133081 CGCAGCGCCCATTCGGCCTT 133100 ||| ||||| || ||||| Sbjct 583627 TTCAGAGCCCAGTCAGCCTT 583608 Score = 120 bits (132), Expect = 3e-22 Identities = 192/275 (70%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 ||||| || ||||| || || | || ||||| | |||||||| |||||| || Sbjct 583486 TAGGTATCAATGAGTAAGGAGTATGTCTCGGAGTGAATATTCTCCATCATGATTTGGAAA 583427 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 || |||||||| || || ||| | ||| || || ||||||||| || || || Sbjct 583426 CCATAAAAGCATCGAGCTTCGGGAATCTGAACCTCGCCGCTGAAACGCTCAACGAGGTTC 583367 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 ||||| ||||| |||||| ||| || || || || || | ||| ||| || | | Sbjct 583366 TCGTTCACGATACCGTCGGAGGCAGCAAAGAAAGCTAGGATGTGGGAGATAAAGTATTTC 583307 Query 133348 TCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| ||||| | | | ||||||| || ||||||||||| || | |||||| Sbjct 583306 TCGTCCTCGTTGATTCTATTGTTCCAGTCGTGCAGGTCCTTGGACAAATCAATCTCCTCA 583247 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || ||||||||||| |||||||| Sbjct 583246 GCGGTCCAGAAGGAGGCCTCGGCTTTCTTGTACAT 583212 >seq21 Length=742638 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| |||| || ||| | | | Sbjct 187869 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC 187928 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| |||||||| ||| | ||||| Sbjct 187929 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 187988 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | || |||||| |||||||||| Sbjct 187989 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 188048 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 188049 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 188095 >seq45 Length=386842 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| | || || || || | Sbjct 237892 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACATTGGAAGTAGAATCCTCA 237833 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| || || ||||| | |||| Sbjct 237832 GACACCATTGACAACG--TGAAGAGCAAGATCCAAGACAAGGAAGGTATTCCTCCTGACC 237775 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || |||||||| || | |||||||| | ||| |||| Sbjct 237774 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACA 237715 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| | || || || |||||||| ||| | | ||||||| Sbjct 237714 ACATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCCGTCTTCGTGGCGGCC 237664 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || || || ||||||||| | || ||||| | | Sbjct 238120 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCTTGGAGGTCGAATCATCA 238061 Query 38304 GACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | |||| ||||| | ||||| || || || || | ||||| Sbjct 238060 GACA-CGATCGACAATGTGAAGAGCAAAATTCAAGACAAGGAAGGCATCCCTCCTGACCA 238002 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || || ||||| || |||| || || || | ||||||||| Sbjct 238001 GCAGCGACTCATCTTTGCTGGTAAGCAGCTAGAGGACGGACGAACTCTAAGCGACTACAA 237942 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| | |||||||| |||||||| || ||| | || || Sbjct 237941 CATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGGTTGCGTGGTGG 237894 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAA 38315 || || || || || || || ||||||||| |||| || ||| || |||||| | | Sbjct 238336 GTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTATTGAC 238277 Query 38316 ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATT 38375 | | || || |||| |||||||| || || || ||||||| ||||| | || Sbjct 238276 AATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCGTTTGATC 238217 Query 38376 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAA 38435 | ||| ||||| || || || |||| || ||||||| |||||||||||||||||||||| Sbjct 238216 TTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCAAAAGGAA 238157 Query 38436 GCGACGCTGCATTTGGTGCTGCG 38458 | || || || | || ||||| Sbjct 238156 TCCACTCTCCACCTTGTCCTGCG 238134 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || |||||| | || || ||| || || Sbjct 238631 ATGCAGATCTTCGTCAAGACTCTCACCGGTAAGACTATCACCTTGGAGGTGGAGTCCTCC 238572 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || || | ||||| || || ||||| | ||||| Sbjct 238571 GATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAG 238512 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | |||| ||| || || || || || || | |||||| | |||||||||| Sbjct 238511 CAACGCTTGATTTTCGCCGGAAAGCAACTTGAAGATGGTCGCACCTTGTCCGACTACAAC 238452 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| ||| || || || ||||| |||||| || | || ||| Sbjct 238451 ATCCAGAAGGAGAGC-ACCCTCCACTTGGTCCTGCGTCTGCGCGGTGGC 238404 >seq25 Length=698551 Score = 127 bits (140), Expect = 2e-24 Identities = 145/191 (76%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 |||| || ||||| || || ||||||||||| ||||||||| |||| |||||| || ||| Sbjct 513634 TGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 513693 Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | || | | |||| || |||| ||||| ||||| || ||| | || || Sbjct 513694 ACACCATCGACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 513751 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || |||| || |||||| |||||||| Sbjct 513752 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTCTCAGACTACAA 513811 Query 38423 CATCCAAAAGG 38433 |||||| |||| Sbjct 513812 CATCCAGAAGG 513822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172149775360