Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq45 147 5e-30 seq21 111 3e-19 >seq45 Length=386842 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || ||||| ||||| ||| ||||||| || || || ||||| Sbjct 237917 GTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCCTCTAGCTG 237976 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| ||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct 237977 CTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGAATTTT 238036 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || ||||| || ||| || || | ||| | |||||||| || Sbjct 238037 GCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTCTTTCCGGT 238096 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | |||||| Sbjct 238097 AAGAGTCTTGACGAAGATTTGCAT 238120 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||||||| || || | ||||| || ||||| Sbjct 237689 GTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCCAGCTG 237748 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || || || ||||| |||||||| ||||| |||||||| || || Sbjct 237749 CTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGGATCTT 237808 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| ||||||||||| || ||| ||||| | || | ||||| || || Sbjct 237809 GCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCTTGCCCGT 237868 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 237869 CAATGTCTTGACGAAGATCTGCAT 237892 Score = 140 bits (154), Expect = 7e-28 Identities = 142/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||||||| || ||||| || ||||| ||| || |||| || |||||| Sbjct 238140 ACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCG 238199 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| | || || ||||| ||||| |||||||||||||| || Sbjct 238200 AGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGG 238259 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||| ||||| || ||||| || ||||| | |||||| Sbjct 238260 ATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTT 238319 Query 195112 CCTGT 195116 || || Sbjct 238320 CCAGT 238324 >seq21 Length=742638 Score = 111 bits (122), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||| ||| || || || ||||| |||| || || | ||||| ||| Sbjct 188077 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCG 188018 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 188017 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGG 187958 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| | ||||| || ||||| | ||||| Sbjct 187957 ATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTA 187898 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 187897 CCCGTGAGGGTCTTGACGAAAATCTGCAT 187869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480121615768