Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq45 107 1e-18 seq25 104 2e-17 seq21 100 2e-16 >seq45 Length=386842 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || ||||| ||||| ||||| || | | | || |||| || Sbjct 238423 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCA 238482 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || |||||||| || || | ||||||||||| | || | || |||||||| | Sbjct 238483 AGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGA 238542 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| || | ||||| || || ||| || || | ||| || || Sbjct 238543 ATCTTCGACTTGAC--AT--TGTCGATGGTATCGGAGGACTCCACCTCCAAGGTGATAGT 238598 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||| || ||||||||||| Sbjct 238599 CTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 >seq25 Length=698551 Score = 104 bits (114), Expect = 2e-17 Identities = 139/191 (73%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| |||| | || || ||||| |||||||| || || Sbjct 513820 TTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATG 513761 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || ||||| || | || | ||||||||||| ||||| ||||| || | Sbjct 513760 AGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT--T 513705 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| || || ||| || |||| ||| ||||| || |||||||| |||||||| Sbjct 513704 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 513645 Query 34970 AAAGATCTGCA 34980 |||||||||| Sbjct 513644 GAAGATCTGCA 513634 >seq21 Length=742638 Score = 100 bits (110), Expect = 2e-16 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| || ||| | || |||| || ||||| || ||| Sbjct 188065 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCG 188006 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| | || | ||||||||||| ||||| ||| Sbjct 188005 GCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 187946 Query 34905 ACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| || | | ||| || |||| ||| || || || |||||||| Sbjct 187945 AC--AT--TGTCGATGGTGTCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCCGTGAG 187890 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| || || |||||||| Sbjct 187889 GGTCTTGACGAAAATCTGCAT 187869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633188526912