Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq10 113 5e-20 >seq10 Length=1111123 Score = 113 bits (124), Expect = 5e-20 Identities = 443/692 (64%), Gaps = 16/692 (2%) Strand=Plus/Plus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 |||||| ||||| || || |||| | | || ||||| || || || ||||| | || Sbjct 724353 CTCAAACTCATCGCCGTAGACATCGGCAAGACCGGGACACTCGTTGGGGCACATTAGTGT 724412 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244 ||| | | |||| || | |||| || | ||| || |||||||| || | || Sbjct 724413 CCAGGTACCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCAAGGAA 724472 Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 | || | | | | ||| || ||||| ||| || || || | || || | Sbjct 724473 GAGGTCACGGGCACGAACTTCCTCCTTGCCGTGGTTCTTTCGCAGATCCAAGAACTCGAA 724532 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 | ||| | |||||||| || | || || || | | || ||||| || ||||| || Sbjct 724533 GACATCCGAGTGCCATGGCTCAAGGTAGATAGCAAAAGCGCCAGGTCGCTTGTTACCACC 724592 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 |||||| | || | ||| || ||||| | || | |||||| || || ||||||||||| Sbjct 724593 TTGATCGACGTAACGGGCTGTGTTGTTGAAGACACGTAACATGGGAACGATACCATTTGA 724652 Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATA----TTACTAATTGAAA 48480 | |||| ||||| || | ||| ||| || | || | ||| ||| ||| | Sbjct 724653 TGTACCGTTGGTACCGGCAATGTAAGAGCCCGTGGCGCGGATACGGTGTAC--ATT--CA 724708 Query 48481 TACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTC 48540 || || || || |||||||| || || | ||||| || || || || || || | Sbjct 724709 GGCCGATTCCTCCGGCCATTTTGGAAATCATCGCACATGTCTTGAGAGTGTCGTAGATAC 724768 Query 48541 CTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAG 48600 |||| || |||||||| |||| | | | || ||| |||||||| || || | Sbjct 724769 CTTCAATGCTATCATCCTTCATGTCGACCAAGAAGCAAGACGACATTTGAGGCTGTGGTG 724828 Query 48601 TTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTAT 48660 |||| | ||| || | || ||||| ||||| | || | || || | | || | Sbjct 724829 TTCCGGCATTGAACAGCGTAGGAGAAGCATGTGTGAAGTACTTGAGGGACATGAGGTTGT 724888 Query 48661 ATGTTTCAATAACAGAATCTA---TATCCCATTGATGTATACCTATAGATACACGCATTA 48717 | || || | || || | |||| | | || || | || |||||||| | Sbjct 724889 AGGTCTCGAGGACTTTCTCAACATTATCTCCCCAA---ATGCCAACAGCCACACGCATAA 724945 Query 48718 ACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCA 48777 ||| | ||| ||||| || ||||| || || || ||||| ||||||||| || | Sbjct 724946 TCATGTGTTGGGGTCTCTCGACAATCTTTCCGTTAATCTTCAAGAGATATGATCGCTCTA 725005 Query 48778 ATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807 || |||||||| || || | ||| ||||| Sbjct 725006 GCGTCTTAAAACCGAAGTATTGGTAGTTGAAA 725037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108069258560