Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq46 122 7e-22 seq45 87.8 1e-11 >seq46 Length=381262 Score = 122 bits (134), Expect = 7e-22 Identities = 258/383 (67%), Gaps = 3/383 (1%) Strand=Plus/Plus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || ||||||||||||||||| ||||| || | || || ||||| |||||||| | Sbjct 257206 AACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTTTCTGGTGAT 257265 Query 552270 ACT-GATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 || | | || | || || | || | ||| | |||||| | | || ||||| ||| Sbjct 257266 ACCAGCTCCAAGTCCACCAACGAGATCCTGCTTCTCGATGTTGCCGCGCTCTCTCTCGGT 257325 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || || | ||| ||||| ||||| || || ||| | || || ||||| || Sbjct 257326 ATCGAGACTGCTGGTGGTATGATGACCAAGCTCATCCCCCGCAACACCACTATCCCGACC 257385 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || || ||| || || || || | || ||||| || ||| ||| ||||| | Sbjct 257386 AAGAAGTCTGAGGTCTTCTCAACCTTCTCCGATAACCAGCCTGGTGTGCTCATTCAGGTC 257445 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 | || || || | || |||||| || || || | || || | ||| | | Sbjct 257446 TACGAGGGTGAGCGTCAACGCACTAAGGACAACAACCTGCTCGGCAAGTTTGAGCTTACC 257505 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||||||||| || || ||||| || || || ||||| ||||| |||||| |||| ||| Sbjct 257506 GGTATTCCTCCCGCCCCCCGTGGTGTTCCCCAGATTGAGGTTACCTTCGATCTCGACGCC 257565 Query 552567 AATGGAATTTTGAATGTGACTGC 552589 || ||||| |||| || |||| Sbjct 257566 AACGGAATCATGAACGTCTCTGC 257588 >seq45 Length=386842 Score = 87.8 bits (96), Expect = 1e-11 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||||||||| |||||||| ||||| | | |||||| ||||||||||| ||||| || Sbjct 238476 ATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTT 238535 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAA 563437 || ||||| || || || || || ||||| | | || | || || | || | Sbjct 238536 GTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAG-GACTCCACCTCCAAGGTGA 238594 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| ||||| || ||||| || ||||| || ||||| Sbjct 238595 TAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029290500010960