Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq45 118 7e-21 >seq45 Length=386842 Score = 118 bits (130), Expect = 7e-21 Identities = 120/154 (78%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||||||||||||||| || ||||| | ||||| || ||||||||||| |||||||| Sbjct 238476 ATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTT 238535 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| |||||||| |||||| || || ||||| | | | | | ||| ||| | Sbjct 238536 GTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAA-GGTGA 238594 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| ||||||||||||||||| ||||| || || Sbjct 238595 TAGTCTTACCGGTGAGAGTCTTGACGAAGATCTG 238628 Score = 86.0 bits (94), Expect = 4e-11 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 480605 TAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGG 480664 |||||||| || || || ||||| |||||||| || || || || || |||||||| Sbjct 237953 TAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGG 238012 Query 480665 AATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAG 480723 || ||||||||||||||||| || || ||| || || || || | || | | Sbjct 238013 GATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGAC 238072 Query 480724 TTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| ||| || || || ||||| |||||||| ||||| ||||| Sbjct 238073 CTCCAA-GGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTG 238117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268174738935392