Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq45 95.1 2e-14 >seq45 Length=386842 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | | || | || || || | |||| ||| || ||| || || || Sbjct 237891 ATACCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCG 237950 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || |||| |||| || | || ||||||||||| || | || ||| |||||||| Sbjct 237951 CTTAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGA 238010 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| | || ||||| || || ||||| ||||| Sbjct 238011 GGGATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCG 238070 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | || ||||| || || || | || || | ||| || ||||| Sbjct 238071 ACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || |||||||| || || | | ||| |||||||| || || ||||| || Sbjct 237738 TCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTG 237797 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || | || || || || || ||||| ||||||||||| | || ||| Sbjct 237798 TCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATG 237857 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || ||||| || | ||| |||||||| Sbjct 237858 GTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134823323200