Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10 140 1e-27 seq39 102 2e-16 seq5 93.3 1e-13 seq28 89.7 2e-12 >seq10 Length=1111123 Score = 140 bits (154), Expect = 1e-27 Identities = 351/533 (66%), Gaps = 3/533 (1%) Strand=Plus/Plus Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 ||||| | |||||| ||||| || || || ||||| || | ||| | || |||| Sbjct 724492 TCCTCCTTGCCGTGGTTCTTTCGCAGATCCAAGAACTCGAAGACATCCGAGTGCCATGGC 724551 Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086 || || || ||||||||| ||| | |||| ||||| ||||| || || || || Sbjct 724552 TCAAGGTAGATAGCAAAAGCGCCAGGTCGCTTGTTACCACCTTGATCGACGTAACGGGCT 724611 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || || |||||||||| || ||| |||| |||||||| || || || ||||| ||| | Sbjct 724612 GTGTTGTTGAAGACACGTAACATGGGAACGATACCATTTGATGTACCGTTGGTACCGGCA 724671 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206 || | || || | | ||| | | || | || || || || || || | | ||| Sbjct 724672 ATGTAAGAGCCCGTGGCGCGGATACGGTGTACATTCAGGCCGATTCCTCCGGCCATTTTG 724731 Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266 ||||| || ||| ||| | ||| | | | ||||||||||| |||||| | ||| Sbjct 724732 GAAATCATCGCACATGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCATCCTTCATG 724791 Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326 | | |||| || | |||||| |||||||||| || ||||| || ||||| Sbjct 724792 TCGACCAAGAAGCAAGACGACATTTGAGGCTGTGGTGTTCCGGCATTGAACAGCGTAGGA 724851 Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGA 156386 | ||||| | || ||||| ||||| | ||| ||||| | ||||||| | Sbjct 724852 GAAGCATGTGTGAAGTACTTGAGGGACATGAGGTTGTAGGTCTCGAGGACTTTCTCAACA 724911 Query 156387 TTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATC 156446 ||| || ||| | | || || | ||| ||| || || || | ||| |||||| Sbjct 724912 TTATCTCCCCAAATGCCAACAGCCACACGCATAATCATGTGTTGGGGTCTCTCGACAATC 724971 Query 156447 ACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||| | ||| || || |||| || || || || ||||| ||||| || Sbjct 724972 TTTCCGTTAATCTTCAAGAGATATGATCGCTCTAGCGTCTTAAAACCGAAGTA 725024 >seq39 Length=515234 Score = 102 bits (112), Expect = 2e-16 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||| | | ||||| || ||| || || || ||||| ||| | |||||| ||||| Sbjct 499847 GTCTTCAAGAGCCTTGACTAGACGTCGTTGGATGTAACCTGTTTCGGCTGTTTTCACAGC 499788 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 || || |||||||| ||||||| |||| || || ||| | | |||| || ||| Sbjct 499787 AGTGTCGATTAGACCCTCACGACCTGCCATGGCGTGAAAGTAAAACTCTGAAGGCGTTAG 499728 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | | || | ||||| |||||||| || || || || | ||| ||| || Sbjct 499727 ACCACGCAGGTACGAATTTTCAACAAAACCACGGGCTTCTGGTGAGTAGTCATCCTTTGT 499668 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || |||| ||| | || | ||||| | ||||||||||| || ||||| ||| Sbjct 499667 GAAATGAGGCAAGGTTCGGTATTTGAAGCCGAAGGGGATACGCTTGCCTTCAACAACCTG 499608 Query 302811 CTGTCC 302816 ||| || Sbjct 499607 CTGGCC 499602 >seq5 Length=1427630 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | ||| | |||||| || |||| || || | || | || || Sbjct 196905 ATGAGGCCACAGATTTCACAAATATGGACTCTAAAAGCGTCGGAAACTTCGAACAGGCGC 196964 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| |||| | || || || | |||||| ||||| || |||||||| |||||| Sbjct 196965 TCCTTTAGGAAGGCCGCAGCGCCATGAGCAATCATGCAATCGCGTTCCATTTCTCCGAAA 197024 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 |||||||||||||| ||||| | ||| ||| | ||||| ||||| Sbjct 197025 CGAAGACCACCATCACGAGCACGACCTTCGACGGGCTGTCGAGT 197068 >seq28 Length=668342 Score = 89.7 bits (98), Expect = 2e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510 ||||| ||||||||||| | || |||||| ||| | | ||| || ||| Sbjct 583605 AAGAAGGCTGACTGGGCTCTGAAGTGGATCACCGACCGCAACTCTACTTTCGCCCAACGT 583664 Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570 ||| |||| || || | || || || || || ||||||||||| ||| ||| ||||| Sbjct 583665 CTCATTGCCTTCGCCGCCGTTGAAGGTATCTTCTTCAGTGGTGCTTTCGCCTCCATTTTC 583724 Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630 ||||| || ||||||||| | | || || ||| ||| || || || || || || | Sbjct 583725 TGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACTTTCTCCAATGAGCTCATCTCGCGT 583784 Query 133631 GACGAGGCACTTCACACCGAATTTGCC 133657 ||||||| || || || || |||||| Sbjct 583785 GACGAGGGCCTCCATACTGATTTTGCC 583811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815638803048