Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq10 127 2e-23 seq28 109 7e-18 seq1 91.5 2e-12 >seq10 Length=1111123 Score = 127 bits (140), Expect = 2e-23 Identities = 215/309 (70%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || |||||||| || || |||| ||| ||||| || | |||||| |||| || || || Sbjct 724594 TGATCGACGTAACGGGCTGTGTTGTTGAAGACACGTAACATGGGAACGATACCATTTGAT 724653 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||||||| || || | ||| | ||| | |||||| | ||| | | |||| Sbjct 724654 GTACCGTTGGTACCGGCAATGTAAGAGCCCGTGGCGCGGATACGGTGTACATTCAGGCCG 724713 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 || || |||||| ||||| || | ||| || ||| ||||| ||||||||||| || || Sbjct 724714 ATTCCTCCGGCCATTTTGGAAATCATCGCACA-TGTCTTGAGAGTGTCGTAGATACCTTC 724772 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || |||||||||| || | ||||| ||||| |||| || || | || || Sbjct 724773 AATGCTATCATCCTTCATGTCGACCAAGAAGCAAGACGACATTTGAGGCTGTGGTGTTCC 724832 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||| ||||| ||||| || | || ||||| ||| | |||||| || |||||| Sbjct 724833 GGCATTGAACAGCGTAGGAGAAGCATGTGTGAAGTACTTGAGGGACATGAGGTTGTAGGT 724892 Query 1630365 GGCGAGCAC 1630373 |||| || Sbjct 724893 CTCGAGGAC 724901 Score = 113 bits (124), Expect = 6e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| || ||||| || || |||||| | ||||| || |||||||||||| Sbjct 677881 GACAGCATAGGAGGCACAGTCACCTGCGTGATTAAGAACGTACCCAGCGGCCTCGGCGAG 677822 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| ||||||| | ||||||||||||||||| || || ||||| Sbjct 677821 CCCTGCTTCGACAAGCTCGAGGCGGAACTCGCCCACGCCATGCTCAGCATACCCGCCACA 677762 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| |||||||| || Sbjct 677761 AAGGGTTTCGAGATCGG 677745 >seq28 Length=668342 Score = 109 bits (120), Expect = 7e-18 Identities = 176/250 (70%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || |||||| ||||| ||||| |||||||| |||||||||| Sbjct 584107 GCCTTCTGGTAATCACCAACGCGCTTTTCGAAGAAGTTTGTCTTGCCACCGAGCGAGATG 584048 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808 |||||| | ||| || || | || |||| ||| || || | ||||| Sbjct 584047 TTCTCCATAAAATCGAAGGGATTAGTCGAGCGGTAGACCTTGTCATTGCCTAAAGCGACA 583988 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||| || |||||||| |||||||||||||| ||||||| ||||||||| |||| Sbjct 583987 --AGCAAACGATCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATCCCGA 583930 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 || || ||||| | || ||| ||| |||| ||| |||| || || ||||| | Sbjct 583929 GCAGAGCACAAGGCAGGGCTTCTGTCAGAAATTCTTGCTCAATCTTAACAGCATCGACTA 583870 Query 868929 TGATCTGCCT 868938 ||| |||||| Sbjct 583869 TGA-CTGCCT 583861 Score = 89.7 bits (98), Expect = 6e-12 Identities = 113/155 (73%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || |||||||| || || |||||||||||||| || |||| | |||| || ||| Sbjct 583756 AGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCACTGAAG 583697 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||| || || |||||||| ||| | ||||| || | ||| || || | || || Sbjct 583696 AAGATACCTTCAACGGCGGCGAAGGCAATGAGACGTTGGGCGAAAGTAGAGTTGCGGTC- 583638 Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 | |||||||||||| |||||||| ||||| || Sbjct 583637 --GGTGATCCACTTCAGAGCCCAGTCAGCCTTCTT 583605 >seq1 Length=2109255 Score = 91.5 bits (100), Expect = 2e-12 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||| || ||||| ||||||||||| || || |||| || ||| | || |||||||||| Sbjct 1108058 CCAATTATCTCGATATCAAGCCTCTTCTTGACGTTGGCTGTAAGACCGTTGCCAACATGA 1107999 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||||| || || || ||||||||||| || || || || || Sbjct 1107998 TCAAGGGTAAATCCCCTGAGGAGATCCGAAAAACTTTCAATAT 1107956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107130665272968