Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq45 147 4e-30 >seq45 Length=386842 Score = 147 bits (162), Expect = 4e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| || || || |||||||| ||||| || ||||| || || || || Sbjct 237892 TACCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGC 237951 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 |||| ||| ||||| ||||| || || ||||||||||| |||| || || || |||| Sbjct 237952 TTAGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAG 238011 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || |||||||| |||||||| |||||| || ||||| || ||||| || | ||| Sbjct 238012 GGATGCCTTCCTTGTCTTGAAT-TTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCG 238070 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || ||||| || || | ||||| || || || ||||| Sbjct 238071 ACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 136 bits (150), Expect = 8e-27 Identities = 164/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||| || ||||| || ||||| || || ||||| || | | ||| Sbjct 237677 ACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACC 237736 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| || | || || || ||||| || |||||||| Sbjct 237737 ATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTT 237796 Query 82715 ATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTT 82772 ||||| ||||| ||| || || || ||||| || || | ||| |||||||||||| || Sbjct 237797 GTCTTGGATCTT-GCTCTTCACGTTGTCAATGGTGTC-TGAGGATTCTACTTCCAATGTG 237854 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| ||||| ||||| || || |||||||| Sbjct 237855 ATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825891715256