Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq45 120 2e-22 >seq45 Length=386842 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | ||||| || || |||||||| || || |||||||| ||||| Sbjct 238405 CCACCGCGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 238464 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || || | ||| |||||||| |||||||| || ||||| || | || Sbjct 238465 AAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGA 238524 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||| ||| || | ||| ||| | ||| ||| || ||||| Sbjct 238525 ATACCTTCCTTGTCCTGAATCTTCGACTTGA-CATTGTCGATGGTATCGGAGGACTCCAC 238583 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 238584 CTCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| || ||||| |||||||| ||| ||| || || |||| || | ||| Sbjct 238146 TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCGAGTTGC 238205 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||||||||||||| || | || | ||||||||||| || ||| Sbjct 238206 TTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTC 238265 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | |||||| || ||||| || | ||||| || || || || Sbjct 238266 -GACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGT 238324 Query 33726 TAACGTTTTTACAA 33739 || || || |||| Sbjct 238325 TAGGGTCTTGACAA 238338 Score = 84.2 bits (92), Expect = 1e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | |||||| || || || ||| || || |||||||||||| || ||||| | Sbjct 237677 ACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACC 237736 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || || || || || || | ||||||||| || | || | |||||| || Sbjct 237737 ATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTT 237796 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || ||| || | ||| | |||||| ||||| || || | |||| Sbjct 237797 GTCTTGGATCTTGCTCTTC-ACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGA 237855 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || || || || || |||||||||||| Sbjct 237856 TGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCATA 237893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703583367680