Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq45 129 5e-25 seq21 122 8e-23 >seq45 Length=386842 Score = 129 bits (142), Expect = 5e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| |||| | |||||| || | |||| |||||| ||||||||||| ||| Sbjct 237894 CCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTT 237953 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| |||| || ||||||||||| ||||| || | ||||||||||| | ||| Sbjct 237954 AGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGG 238013 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG--CTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | || ||||||| | ||| ||||| ||||| | | | | |||||| ||||| | Sbjct 238014 ATGCCTTCCTTGT-CTTGA-ATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGA 238071 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| ||||| || || || || | ||| || || || || ||||| Sbjct 238072 CCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || |||||||||||| || ||| || | || || Sbjct 237683 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTC 237742 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||||||| || || || | ||||||||||| | ||||| | |||||||| Sbjct 237743 CAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTG 237802 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | ||||| ||||| || |||| ||||| || | Sbjct 237803 GATCTTGCTCTTCA-CGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCT 237861 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||||||| || || || || |||||||| Sbjct 237862 TGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 93.3 bits (102), Expect = 4e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| ||| | |||||| |||| || || ||||| || || || Sbjct 238158 TCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCGTCTTCGAGTTGCTTGCCGGCGAAG 238217 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | ||| | || || |||||| |||||| ||| | | | Sbjct 238218 ATCAAACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTCGACTTGACATTG 238277 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| || |||||||| | ||||| || || || || | || || ||| Sbjct 238278 TCAATAGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGTTAGGGTCTTGACA 238337 Query 35726 AATA 35729 | || Sbjct 238338 ACTA 238341 >seq21 Length=742638 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||| | || | || |||||||| || |||||||| |||| Sbjct 188095 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 188036 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || |||| ||||||||||| | || Sbjct 188035 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGG 187976 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | |||||||| || |||||| Sbjct 187975 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACC 187916 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || |||||||| | || || || || |||||||| Sbjct 187915 TCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 187869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793013968320