Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10 179 5e-40 seq28 102 1e-16 >seq10 Length=1111123 Score = 179 bits (198), Expect = 5e-40 Identities = 1165/1855 (63%), Gaps = 49/1855 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGT-GAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAG 68432 || ||||| || ||| ||| | || | || ||| ||||| |||||||| || || || || Sbjct 723202 GTGAACTGGATAGGTTGAGCA-GCAGCTTGTGTTCGTAGGTAGTACATGCCAGTCTTAAG 723260 Query 68433 ACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTAT 68492 ||| || |||| || ||| ||||| || || | ||| | || || || Sbjct 723261 ACCGAGCTTCCACCCAGTGAAGTGCATGCTAGTGATCTTGCCCATTGTGGGTTCCCTCAT 723320 Query 68493 ATGAATATTCATCGATTGACTTTGA----TCGATGAAAGCTCCTCTATCTGCCGCCATTT 68548 |||||||| || ||||| ||| || |||||||| || | || || ||||||| Sbjct 723321 GTGAATATT----GAGTGACTGTGACTGGTCAATGAAAGCACCACGGTCAGCGGCCATTT 723376 Query 68549 TTATAATACTCTT--TTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATC 68606 | || || || ||| | |||||||| | |||||| | | |||| || | Sbjct 723377 GGACAA--CTGTTCGTTGGGAGATTTCCCACACAGTCTTGTACAAGGCCTTGACCTCCGC 723434 Query 68607 TGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663 ||| | ||| | |||||||||| || ||||| || | ||||| |||||| || | Sbjct 723435 TGGGATGCTGGGTATATTTTGAATCGAACCACCCTCAGCGATAATGCGATTCTTCATATT 723494 Query 68664 ATCATTCCACAATTTTCTC---TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTG 68720 ||| ||| | | | | || | | | || || || || || | ||| Sbjct 723495 GTCAGACCAGA---TGCCCAAATCGACCAGGTCCTTCAGTAGCCAGGGGTTGACAACTTG 723551 Query 68721 AAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 68780 ||||| || | | || | ||||| ||||||||| ||| || || || | |||| Sbjct 723552 GAATTCGCCGGCCAGGACACGACGAGAGTAAATATTCGAGGTGTAAGGCTCGAAGCATTC 723611 Query 68781 ATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 || || |||||||| || | || |||||||||||||| |||| | | ||| || Sbjct 723612 GTTGTTGCCCAGAATCTGCGAGGTACTGGCAGTTGGCATAGGAGCCATGAGGAGACTGTT 723671 Query 68841 TCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGG 68900 | | ||| | | |||||| || || ||| ||| |||||||| || || || Sbjct 723672 GCGTACACCGTTTTGCTTGATTTGCTCCTTGAGAGTAGCCCAGTCCCAAAGGTCTGACGG 723731 Query 68901 TACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGT 68960 ||||||||| | ||||| || ||||| || | | || || || | || || Sbjct 723732 AGTAACATTCCACATGTCGTACTGAAGAATGCCCTGAGAGACAGGAGAGCCCTCGTAAGT 723791 Query 68961 TTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAAT 69020 || | ||||| | || || || || ||| || ||| ||| || || Sbjct 723792 AGAGTAGGTGCCTTCTTCTTTGGCAAGCTCCATTGATGCAGTCAAAGCAGCGTGGTACAT 723851 Query 69021 TGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAA 69080 ||| || || |||| ||| ||||| | | | || || | ||||| || | | Sbjct 723852 TGTCTCAAAGATCTGCTTGTTGAGTTGTCGAGCCTCGGGCGATTCGAAAGGCATGCGGAG 723911 Query 69081 AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT 69140 | || || | ||| || | || || || |||| ||| ||||| | || | | | || Sbjct 723912 AGCAAGGAAGGTATCAGCTAGGCCTTGGACACCAAGACCAATAGGACGGTGGCGCATGTT 723971 Query 69141 TGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200 | | || || || | || |||| || || || | || || || || || Sbjct 723972 GCTATTGCGTGCCTCGGGGACCGGGTAATGGTTTGCGTCGATGACCTTGTTCAGGTTCCG 724031 Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCG-TCC-ATCTATAACA 69258 || || |||| || || | || || |||| ||| | | ||| | ||||| Sbjct 724032 CACAACAACTTGGGTGACATCATGCAGCTTTTGAAAGTCATAGCTCTCCGAGTTATAATC 724091 Query 69259 AACATATT----CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314 || | || || | ||| || | ||| ||||| || || || | | | | Sbjct 724092 TACGAAGGACGGCAAAGCCATAGAGGCCAAATTGCAAACGGCGACTTCGTCCGGAGCGGA 724151 Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374 || | || ||||| || || |||||| || ||| || ||||| || | ||| || Sbjct 724152 GTACTCGATGATCTCAGTGCAGAGATTAGAACTACGGATCGTACCCAGGTTCTTCTGGTT 724211 Query 69375 ACTCTTTTTGTTA-CAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433 ||||| ||| || | ||||||||| || || ||||| | || || || |||||| Sbjct 724212 GCTCTTGCGGTTGGCATG-GTCCTTGTAGAGCATGAACGGGTTTCCGGTCTCGGTCTGAG 724270 Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAAC---GCTTCT 69490 || | ||| | | ||||| | ||| || | | || | | | | || Sbjct 724271 CCTCTAGAATGGCATACCAAAGCTTCTGAGCCTTAA---CCGTTTGGCGGCCGCGACCCT 724327 Query 69491 CTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 | || || || | ||| | ||| || || ||||| || | ||||| | | || Sbjct 724328 CGGCCTCGTACTTCTCGTAGAGGGCC--TCAAACTCATCGCCGTAGACATCGGCAAGACC 724385 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||||| || || || ||||| | || ||| | | | | | ||| || ||||| || Sbjct 724386 GGGACACTCGTTGGGGCACATTAGTGTCCAGGTACCGTTCTTTTCAACACGCTTCATGAA 724445 Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668 ||||| || |||||||| || | ||||| || | || | | ||| || || || Sbjct 724446 GAGATCAGGGATCCAAAGGGCAAGGAAGAGGTCACGGGCACGAACTTCCTCCTTGCCGTG 724505 Query 69669 AttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728 || ||| ||||| | ||||| | | ||| || |||||||| || || || || || Sbjct 724506 GTTCTTTCGCAGATCCAAGAACTCGAAGACATCCGAGTGCCATGGCTCAAGGTAGATAGC 724565 Query 69729 CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGAC 69788 | | || ||||| || || || || ||||| | ||| | ||| ||||| || |||| Sbjct 724566 AAAAGCGCCAGGTCGCTTGTTACCACCTTGATCGACGTAACGGGCTGTGTTGTTGAAGAC 724625 Query 69789 TCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCT 69848 | | ||| |||| |||||||| ||| |||| || || || | ||| ||| || | Sbjct 724626 ACGTAACATGGGAACGATACCATTTGATGTACCGTTGGTACCGGCAATGTAAGAGCCCGT 724685 Query 69849 TGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 69908 ||||| ||| | | || || |||||||| |||||||| || || | ||||| Sbjct 724686 GGCGCGGATACGGTGTACATTCAGGCCGATTCCTCCGGCCATTTTGGAAATCATCGCACA 724745 Query 69909 ACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACA 69968 || | ||||| || ||||| || ||||||||||| |||||| | | || || Sbjct 724746 TGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCATCCTTCATGTCGACCAAGAAGCA 724805 Query 69969 GCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAA 70028 ||||||||| | ||| ||||| ||||| || | |||||||| || || ||||| Sbjct 724806 AGACGACATTTGAGGCTGTGGTGTTCCGGCATTGAACAGCGTAGGAGAAGCATGTGTGAA 724865 Query 70029 CCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTA---TATCCCACTGATG 70085 | || || | || ||||| || || | || || | |||| | | Sbjct 724866 GTACTTGAGGGACATGAGGTTGTAGGTCTCGAGGACTTTCTCAACATTATCTCCC---CA 724922 Query 70086 AATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTAT 70145 ||| || | || |||||||| | ||| || || |||| || || | || || || Sbjct 724923 AATGCCAACAGCCACACGCATAATCATGTGTTGGGGTCTCTCGACAATCTTTCCGTTAAT 724982 Query 70146 TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAA 70198 ||||| || |||||| || || || ||||| || || || | ||| ||||| Sbjct 724983 CTTCAAGAGATATGATCGCTCTAGCGTCTTAAAACCGAAGTATTGGTAGTTGAAA 725037 >seq28 Length=668342 Score = 102 bits (112), Expect = 1e-16 Identities = 324/500 (65%), Gaps = 3/500 (1%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| ||||||||||| || ||||| || || || ||||| | | || || || Sbjct 584104 TTCTGGTAATCACCAACGCGCTTTTCGAAGAAGTTTGTCTTGCCACCGAGCGAGATGTTC 584045 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||| || |||||||| | || || | | ||||| | || | Sbjct 584044 TCCATAAAATCGAAGGGATTAGTCGAGCGGTAGACCTTGTCATTGCCTAAAGCGACAAGC 583985 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || | ||| || || || || ||||| ||||| | | ||||| || | || Sbjct 583984 AAACGATCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATCCCGAGCAGA 583925 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 | || || || || || ||||| |||| || || | || || || ||| | Sbjct 583924 GCACAAGGCAGGGCTTCTGTCAGAAATTCTTGCTCAATCTTAACAGCATCGACTATGACT 583865 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | ||| | || | || || ||| | || || ||||| || |||||| || Sbjct 583864 GCCTCTACGAGTTCCTTGCTGGGCCGATTCTTCAAGTGAGAAAACAATAGGCAGGCAAAA 583805 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 ||| ||| |||||||| || | || | || || || || || || || ||||| Sbjct 583804 TCAGTATGGAGGCCCTCGTCACGCGAGATGAGCTCATTGGAGAAAGTCAGACCGGGCATC 583745 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 ||||||||||| |||||||| || |||| || |||| ||| |||||||| ||||| Sbjct 583744 AGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGCACCACTGAAGAAGATACCTTCA 583685 Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACT--TGTATCATTATGT-ATCCACTTC 39802 || || || || |||| || | | || || | || | | || ||||||||| Sbjct 583684 ACGGCGGCGAAGGCAATGAGACGTTGGGCGAAAGTAGAGTTGCGGTCGGTGATCCACTTC 583625 Query 39803 TGTGCCCAATCAGCTTTCTT 39822 | ||||| ||||| ||||| Sbjct 583624 AGAGCCCAGTCAGCCTTCTT 583605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907907018560