Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq28 86.0 5e-12 >seq28 Length=668342 Score = 86.0 bits (94), Expect = 5e-12 Identities = 201/297 (68%), Gaps = 11/297 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||| ||||| |||| || || ||||| || || || |||||||| Sbjct 583203 ATCTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACCGCTGAGGAGATTGATTTG 583262 Query 43790 ACTAAAGACTTAGCAC-ATTGGATTGCATTAAAACCA-----CAAGAAAAACATTTTATA 43843 | || ||| | |||| | |||| || || || || | || ||| | ||||| Sbjct 583263 TCCAAGGACCT-GCACGACTGGA--ACAATAGAATCAACGAGGACGAGAAATACTTTATC 583319 Query 43844 TCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGT 43903 || | | || || |||||||| |||||| || || || || || | ||| Sbjct 583320 TCCCACATCCTAGCTTTCTTTGCTGCCTCCGACGGTATCGTGAACGAGAACCTCGTTGAG 583379 Query 43904 CGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 || || ||| || ||||| | || ||||| ||||| |||||||| || ||||| Sbjct 583380 CGTTTCAGCG-GCGAGGTTCAGATTCCCGAAGCTCGATGCTTTTATGGTTTCCAAATCAT 583438 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 || || |||||||| || || | ||| | || || ||||| || ||||| || Sbjct 583439 GATGGAGAATATTCACTCCGAGACATACTCCTTACTCATTGATACCTATATCAAGGA 583495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455496224520