Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq45 122 7e-23 seq25 95.1 1e-14 seq10 95.1 1e-14 >seq45 Length=386842 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || ||||| ||||||| | |||| | || || Sbjct 237684 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCATCCTCC 237743 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| ||| | ||||||||||| || || || || | ||| || || || | Sbjct 237744 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACCTTCCTTGTCTTGG 237803 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | |||| | | || | ||||||| || ||| ||||| | || || | ||| Sbjct 237804 ATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAATGTGATGGTCTTG 237863 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||||| || || || ||||| |||||| Sbjct 237864 CCCGTCAATGTCTTGACGAAGATCTGCATA 237893 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||||||| | ||||| || | |||||| || || ||||| ||||||||||| Sbjct 237894 CCACCACGCAACCGAAGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTT 237953 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || |||| || ||||| ||||| || | ||||| ||||| || || || || Sbjct 237954 AGAGTTCGTCCGTCCTCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGG 238013 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || || ||| | |||| | || | ||||||| | ||| || Sbjct 238014 ATGCCTTCCTTGTCTTGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACC 238073 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | || || || ||||| || || |||||||||||| Sbjct 238074 TCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATTTGCATA 238121 >seq25 Length=698551 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || |||||||| | | | || ||||||| ||||| || |||||| | ||| Sbjct 513820 TTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATG 513761 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 |||||||| |||||||| || | ||||| || || ||||||| | || | | || Sbjct 513760 AGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 513701 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAG 27239 | ||||| | || || || || || || || | |||||||| || || ||||| ||| Sbjct 513700 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 513641 Query 27240 ATTTGCA 27246 || |||| Sbjct 513640 ATCTGCA 513634 >seq10 Length=1111123 Score = 95.1 bits (104), Expect = 1e-14 Identities = 283/432 (66%), Gaps = 11/432 (3%) Strand=Plus/Plus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 |||||| ||| |||| |||||||| | ||| ||||||| |||||| |||||||| || Sbjct 724386 GGGACACTCGTTGGGGCACATTAGTGTCCAGGTACCGTTCTTTTCAACACGCTTCATGAA 724445 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT---TTTCTCTTCTGTACC 131718 | ||| || | ||| | || || || || | || || ||| | || | Sbjct 724446 GAGATCAGGGATCCAAAGGGCAAGGAAGAGGTCACGGGCACGAACTTCCTCCT-TG---C 724501 Query 131719 CATAAttttttt-CAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACA 131777 | | || ||| || || || || || || | |||| ||||| || || | || | Sbjct 724502 CGTGGTTCTTTCGCAGATCCAAGAACTCGAAGACATCCGAGTGCCATGGCTCAAGGTAGA 724561 Query 131778 CTGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGT 131834 || | ||||| ||||| ||| ||||||| || | ||| | |||||||| Sbjct 724562 TAGCAAAAGCGCCAGGTCGCTTGTTACCACCTTGATCGACGTAACGGGCTGTGTTGTTGA 724621 Query 131835 ATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGC 131894 | || || |||||||| | | ||| || | | || ||||| | |||||| || Sbjct 724622 AGACACGTAACATGGGAACGATACCATTTGATGTACCGTTGGTACCGGCAATGTAAGAGC 724681 Query 131895 CATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTG 131954 | |||| | ||| ||| || || || || || |||||| | ||| || || | | Sbjct 724682 CCGTGGCGCGGATACGGTGTACATTCAGGCCGATTCCTCCGGCCATTTTGGAAATCATCG 724741 Query 131955 CGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAA 132014 | ||| | | ||||||| ||||||||||| | ||| || | |||||||| || | Sbjct 724742 CACATGTCTTGAGAGTGTCGTAGATACCTTCAATGCTATCATCCTTCATGTCGACCAAGA 724801 Query 132015 AGCAAGAGGACA 132026 ||||||| |||| Sbjct 724802 AGCAAGACGACA 724813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933861395648