Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq45 104 1e-17 seq21 104 1e-17 seq25 84.2 1e-11 >seq45 Length=386842 Score = 104 bits (114), Expect = 1e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||| ||||| ||||||||||| || ||||| || || || | || || Sbjct 238414 AGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGA 238473 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||||||||| || ||||| || || || || || ||||| || || | || ||| Sbjct 238474 CCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCC 238533 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || || | || || || | |||||| |||| ||| Sbjct 238534 TTGTC-CTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAAGGT 238592 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 || || |||||||| | || || || || ||||||||| ||| Sbjct 238593 GATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCATGATGA 238636 >seq21 Length=742638 Score = 104 bits (114), Expect = 1e-17 Identities = 159/223 (71%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||| | ||||| ||||||||||| || ||||| || || || || || || Sbjct 188086 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGG 188027 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || | |||||| ||||| || || | ||||||| Sbjct 188026 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCC 187967 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCT---CTCCACTTCCAC 34664 ||||| |||||| | || || | || ||||| ||| |||||| || | Sbjct 187966 TTGTCCTGGATCTTG-GACTTGACATTGTCGATGGTGTC---GCTAGACTCCACCTCGAG 187911 Query 34665 GGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| || || ||||| || | || || || |||||||||||| Sbjct 187910 GGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 187868 >seq25 Length=698551 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576 |||| || ||||| || ||||| || ||||| |||||||||| || || ||||| || | Sbjct 513822 CCTTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGA 513763 Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT- 34635 | | |||||| || ||||| || | ||||||||||| |||| || | || || | Sbjct 513762 TGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTG 513704 Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695 || ||||| | ||| || || | ||| || || || || || | || ||||| Sbjct 513703 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 513644 Query 34696 AAAATCTGCA-TGTTGATTG 34714 || ||||||| ||| |||| Sbjct 513643 AAGATCTGCACTGTAAATTG 513624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729201080232