Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq45 114 1e-20 >seq45 Length=386842 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 26995 TATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGA 27054 || |||| || || || || || ||| | || || || || ||||| | |||||| | | Sbjct 238341 TAGTTGTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTA 238282 Query 27055 TTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTT 27114 |||| | ||||| || || || |||||||||||||| || ||||| || ||||||| Sbjct 238281 TTGACAATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCGTT 238222 Query 27115 TAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAA 27174 | || | ||||||||| ||| | |||||| | ||| | ||| |||||||| |||| Sbjct 238221 TGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCAAA 238162 Query 27175 AGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || || | || | || |||| | || ||||| || Sbjct 238161 AGGAATCCACTCTCCACCTTGTCCTGCGCCTTCGTGGTGGTAT 238119 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || || | ||||| ||| | || Sbjct 237892 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACATTGGAAGTAGAATCCTCA 237833 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || || || || || Sbjct 237832 GACACCATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAAGGTATTCCTCCTGACCAG 237773 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || |||| || || ||| | |||||||||| Sbjct 237772 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACAAC 237713 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || |||||||| ||| | || ||||| | ||| | || || ||| Sbjct 237712 ATCCAGAAGGAGTCTACCCTCCACTTGGTGCTCCGTCTTCGTGGCGGC 237665 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| ||||| ||| | || || | || || ||| | || Sbjct 238120 ATGCAAATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCTTGGAGGTCGAATCATCA 238061 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || |||||||||||||| |||||||| || || || || Sbjct 238060 GACACGATCGACAATGTGAAGAGCAAAATTCAAGACAAGGAAGGCATCCCTCCTGACCAG 238001 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || | || ||| | || | ||| |||||| Sbjct 238000 CAGCGACTCATCTTTGCTGGTAAGCAGCTAGAGGACGGACGAACTCTAAGCGACTACAAC 237941 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||| | || ||||| ||||| || Sbjct 237940 ATTCAGAAGGAGTCTACGCTGCACTTGGTGCTTCGGTTGCGTGGTGGTAT 237891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917834606080