Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq45 167 5e-36 seq21 159 8e-34 seq25 140 8e-28 >seq45 Length=386842 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| || || ||||| || |||||||| ||||| ||||| Sbjct 237671 ACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 237730 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| ||||||||||| || |||||||| || || || ||||||||||||| || Sbjct 237731 GCGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACC 237790 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| |||||||| |||||||| || |||||||| ||| ||| || || | Sbjct 237791 TTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAA 237850 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| | ||||| || || | |||||| Sbjct 237851 TGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| |||||||| || ||||||||||| || || ||||| Sbjct 238127 ACGAAGGCGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGT 238186 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| || |||||||| |||||||| | || || ||||| ||||| | || Sbjct 238187 TCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCC 238246 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||||||||| || || || || || ||||| ||| || |||||||| Sbjct 238247 TTCTTTGTCCTGGATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAG 238306 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||| |||||||| || || ||||| |||| Sbjct 238307 GGTGATGGTCTTTCCAGTTAGGGTCTTGACAA 238338 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||| ||| || |||||||| || || | | ||| | |||||| Sbjct 238420 AGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCT 238479 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||| || | |||||| ||||||||||||| |||||||||||| Sbjct 238480 TCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCTTCCTTGTCC 238539 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || |||||||| || ||| || ||||| | ||||| ||| Sbjct 238540 TGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAAGGTGATAGTC 238599 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 238600 TTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || || ||||| || || || || | ||| || Sbjct 237909 AGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCC 237968 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || || || ||||||||||| | ||||||||||| Sbjct 237969 TCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 238028 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || ||||| || ||||| ||||| || ||| ||||| | ||||| ||| Sbjct 238029 TGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTC 238088 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| || || | ||||| Sbjct 238089 TTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 >seq21 Length=742638 Score = 159 bits (176), Expect = 8e-34 Identities = 165/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || | ||||| | ||||| Sbjct 188080 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 188021 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || |||||||| || | ||| ||||||||| Sbjct 188020 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 187961 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||||||||| ||| || |||||||| ||||| Sbjct 187960 TGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGA---CTCCACCTCGAGGGTGATA 187904 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 187903 GTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 187869 >seq25 Length=698551 Score = 140 bits (154), Expect = 8e-28 Identities = 143/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | || ||||| |||||||| || |||||||| Sbjct 513820 TTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATG 513761 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || || || || || | || ||||||||||||||||| || || || ||| Sbjct 513760 AGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 513701 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 |||||||| ||| || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 513700 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 513641 Query 211107 ACCTGCA 211113 | ||||| Sbjct 513640 ATCTGCA 513634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150455429960