Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq45 113 3e-20 seq25 86.0 4e-12 seq21 84.2 1e-11 >seq45 Length=386842 Score = 113 bits (124), Expect = 3e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 23623 GTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA- 23681 || || ||||| || ||||| || ||||| ||||| || || ||| | |||||| |||| Sbjct 238336 GTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTATTGAC 238277 Query 23682 AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAAT 23741 ||| | || | || | | ||||||||||| | || || || || |||||||| || Sbjct 238276 AATGTCAAGTCGAAGA-TCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCGTTTGAT 238218 Query 23742 ATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGA 23801 || |||||||| ||||| ||||||| || || | |||| |||||||| ||||| || Sbjct 238217 CTTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCAAAAGGA 238158 Query 23802 GTCCAC 23807 ||||| Sbjct 238157 ATCCAC 238152 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | ||||| || || ||||| | ||||| || ||| | Sbjct 237892 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACATTGGAAGTAGAATCCTCA 237833 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| |||||| | || || || || Sbjct 237832 GACACCATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAAGGTATTCCTCCTGACCAG 237773 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || ||||| || | ||||| | ||||||||||| Sbjct 237772 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACAAC 237713 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 237712 ATCCAGAAGGAGTCTAC 237696 >seq25 Length=698551 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665 ||| | ||||||| ||||| || ||||||||||| || || ||||| ||||| || || | Sbjct 513628 TTACAGTGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGT 513687 Query 23666 CCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724 || | ||||| | || ||| | || | || || ||||| || || | || || Sbjct 513688 CCTCCGACACCATCGACAATGTCAAGA-GCAAGATCCAGGACAAGGAGGGCATCCCCCCG 513746 Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784 ||||| |||||| | || || ||||| || || || ||||||| || || | || Sbjct 513747 GATCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTCTCAGAC 513806 Query 23785 TACAACATACAAAA 23798 |||||||| || || Sbjct 513807 TACAACATCCAGAA 513820 >seq21 Length=742638 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||||||||| || || ||||| ||||| || || || | Sbjct 187869 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC 187928 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 187929 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCA 187987 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || || || || | || || | ||| ||||| Sbjct 187988 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAA 188047 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 188048 CATCCAGAAGGAG 188060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009171572832