Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq45 176 1e-38 seq21 116 9e-21 seq25 107 5e-18 seq10 89.7 1e-12 >seq45 Length=386842 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | |||||| || || || || |||| ||||||||| || || Sbjct 237671 ACGAAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAATCGCTCAGGGT 237730 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| || || || ||||| || |||||||| Sbjct 237731 GCGACCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGAATACC 237790 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| |||||| || ||||||||||||| ||| || || || Sbjct 237791 TTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCTACTTCCAA 237850 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||||||||| || || | ||| | ||||| Sbjct 237851 TGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 237892 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||||||||||||||| ||||||| ||||| ||| | || Sbjct 238127 ACGAAGGCGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTGAGGGT 238186 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || ||||| || ||||| || |||||||| | || || |||||||| || || || Sbjct 238187 TCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGGATGCC 238246 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||| |||||||| ||| ||| || || ||||| |||| ||||| || | Sbjct 238247 TTCTTTGTCCTGGATCTTCGACTTGACATTGTCAATAGTGTCGGAGGACTCCACCTCGAG 238306 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 238307 GGTGATGGTCTTTCCAGT 238324 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||| | |||||| ||| || || |||| ||||| |||| ||| || Sbjct 238411 CGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTG 238470 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| || ||||| || ||||| || | ||||| ||||| || ||||||||| Sbjct 238471 CGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGGAATACCT 238530 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| ||| |||||||| || |||| ||||| || || Sbjct 238531 TCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGGAGGACTCCACCTCCAAG 238590 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| || | ||| | ||||| Sbjct 238591 GTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCAT 238631 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || || | ||||| ||| | ||||| || || Sbjct 237909 AGCACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCC 237968 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||| ||||| ||||| || ||||| || || || |||||||||||| Sbjct 237969 TCTAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 238028 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||||||| ||||| |||||||| | ||| || || || ||||| ||| Sbjct 238029 TGAATTTTGCTCTTCACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTC 238088 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | |||||| Sbjct 238089 TTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 >seq21 Length=742638 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| | || Sbjct 188090 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGT 188031 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 188030 ACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCC 187971 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 187970 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTAGACTCCACCTCGAG 187911 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||| | || || | ||| | ||||| Sbjct 187910 GGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 187869 >seq25 Length=698551 Score = 107 bits (118), Expect = 5e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| || | | |||| || ||||| |||||||| || |||||||| Sbjct 513820 TTCTGGATGTTGTAGTCTGAGAGGGTTCGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATG 513761 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || || || || || || || |||||||| |||||||| ||| ||| ||| Sbjct 513760 AGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 513701 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 |||||||| |||| || || || | ||||| ||||||||||| | || || | ||| Sbjct 513700 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAG 513641 Query 225706 ACTTGCA 225712 | |||| Sbjct 513640 ATCTGCA 513634 >seq10 Length=1111123 Score = 89.7 bits (98), Expect = 1e-12 Identities = 184/270 (68%), Gaps = 14/270 (5%) Strand=Plus/Plus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGC---GTCTTTGTAGACGATGAAGGGCATGCCCACC 193556 ||||||||| |||| || | |||| ||| ||||||| ||||| || | || | Sbjct 724204 TTCTGGTTGCTCTTGCG---GTTGGCATGGTCCTTGTAGAGCATGAACGGGTTTCCGGTC 724260 Query 193557 TCCGCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCC 193616 || | ||||| | |||||| || |||||| | ||||| || || |||| |||| Sbjct 724261 TCGGTCTGAGCCTCTAGAATGGCATACCAAAGCTTCTGAGCCTTAAC---CGTT-TGGCG 724316 Query 193617 TTTCCTTCCCTC----TCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTC 193672 | ||||| |||||||| ||||| || ||||||| || | ||||||| || Sbjct 724317 GCCGCGACCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCAAACTCATCGCCGTAGACATC 724376 Query 193673 GTCGAGACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCT 193732 | | ||||||||| || || ||||| | || |||| || | |||| || | Sbjct 724377 GGCAAGACCGGGACACTCGTTGGGGCACATTAGTGTCCAGGTACCGTTCTTTTCAACACG 724436 Query 193733 CTTCATGAAGAGGTCAGATGTCCAAATGGC 193762 |||||||||||| |||| |||||| ||| Sbjct 724437 CTTCATGAAGAGATCAGGGATCCAAAGGGC 724466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529610952176