Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq28 116 3e-21 >seq28 Length=668342 Score = 116 bits (128), Expect = 3e-21 Identities = 284/424 (67%), Gaps = 10/424 (2%) Strand=Plus/Minus Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331 || |||||||||||||| || || ||||| | | ||| || || ||||||||||| || Sbjct 584089 ACGCGCTTTTCGAAGAAGTTTGTCTTGCCACCGAGCGAGATGTTCTCCATAAAATCGAAG 584030 Query 4332 GGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACA 4391 |||||||| | | ||| || ||| || ||| |||||||| || || || || Sbjct 584029 GGATTAGTCGAGCGGTAGACCTTGTCATTGCCTAAAGCGACAAGCAAACGATCGGCGACG 583970 Query 4392 AATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA-ATCTCACAGGTAGCGC 4450 || || || ||||| ||||||| | | ||| || || | | | | || ||| || || Sbjct 583969 AACTCGATGTACTGCTTCATGAGGTTGGCGTTCATCCCGAGCAGAGCACA-AGGCAGGGC 583911 Query 4451 GTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCT---TTTATTTT 4507 | ||||| ||| ||||| || || | || || || || ||| || | || Sbjct 583910 TTCTGTCAGAAATTCTTGCTCAATCTTAACAGCATC---GACTATGACTGCCTCTACGAG 583854 Query 4508 ATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAA 4567 || || || ||| |||| |||||||| || ||||||||| ||| | Sbjct 583853 TTCCTTGCTGGGCCGATTCTTCAAGTGAGAAAACAATAGGCAGGCAAAATCAGTATGGAG 583794 Query 4568 ACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626 || ||||| | || | || || || || || || || | |||||||| | ||| | || Sbjct 583793 GCCCTCGTCAC-GCGAGATGAGCTCATTGGAGAAAGTCAGACCGGGCATCAGACCACGCT 583735 Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686 | || ||||| || || | ||| || | ||| ||||| || ||||| |||||||| | Sbjct 583734 TCTTGAGCCAGAAAATGGAGGCGAAAGCACCACTGAAGAAGATACCTTCAACGGCGGCGA 583675 Query 4687 ACGC 4690 | || Sbjct 583674 AGGC 583671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049058714632