Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq45 152 1e-31 seq21 147 5e-30 seq25 145 2e-29 seq10 84.2 5e-11 >seq45 Length=386842 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992 || || || || || ||||| || ||||||||||||||||| ||| ||||| || || Sbjct 238336 GTCAAGACCCTAACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACTATTGAC 238277 Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 || ||||| ||||| |||||||||||||| |||||||| |||||||| || | ||| Sbjct 238276 AATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAGCAGCGTTTGATC 238217 Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 |||||||| || || |||||||| || | || || ||| || ||| ||||||| ||| Sbjct 238216 TTCGCCGGCAAGCAACTCGAAGACGGCCGAACCCTCAGCGACTACAACATCCAAAAGGAA 238157 Query 178113 TCAACACTGCATCTTGT 178129 || || || || ||||| Sbjct 238156 TCCACTCTCCACCTTGT 238140 Score = 145 bits (160), Expect = 2e-29 Identities = 147/189 (78%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || |||||| | |||||||| ||| || Sbjct 238628 CAGATCTTCGTCAAGACTCTCACCGGTAAGACTATCACCTTGGAGGTGGAGTCCTCCGAT 238569 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| ||||| || ||||| ||||||||| Sbjct 238568 ACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAAGGTATTCCTCCTGACCAGCAA 238509 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || ||||||||||| || || |||||||| | || |||| |||| || ||| | Sbjct 238508 CGCTTGATTTTCGCCGGAAAGCAACTTGAAGATGGTCGCAC-CTTGTCCGACTACAACAT 238450 Query 178103 CCAAAAAGA 178111 ||| || || Sbjct 238449 CCAGAAGGA 238441 Score = 118 bits (130), Expect = 3e-21 Identities = 150/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| | || || ||| ||||||| Sbjct 237889 CAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACATTGGAAGTAGAATCCTCAGAC 237830 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || ||||| || ||||| ||||| || ||||| |||||||| Sbjct 237829 ACCATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAAGGTATTCCTCCTGACCAGCAG 237770 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || |||||| ||| || Sbjct 237769 CGTCTCATCTTCGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGCGATTACAACATC 237710 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 237709 CAGAAGGAGTCTACCCTCCA-CTTG 237686 >seq21 Length=742638 Score = 147 bits (162), Expect = 5e-30 Identities = 148/191 (77%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || |||||||| || || ||||| || || || ||||||||||||||||| ||| Sbjct 187872 CAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC--- 187928 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| || ||||| ||||| |||||||| || |||||||| || |||||| Sbjct 187929 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 187988 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||||||||| || |||||||| ||||| | || || |||| || ||| Sbjct 187989 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCCGACTACAAC 188048 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 188049 ATCCAGAAGGA 188059 >seq25 Length=698551 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||||||||| || ||| ||| Sbjct 513636 CAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 513695 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| ||||| ||||| Sbjct 513696 ACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAG 513755 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||||| ||||| || | || || | || || ||| || Sbjct 513756 CGTCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGAACCCTCTCAGACTACAACATC 513815 Query 178104 CAAAA 178108 || || Sbjct 513816 CAGAA 513820 >seq10 Length=1111123 Score = 84.2 bits (92), Expect = 5e-11 Identities = 146/209 (70%), Gaps = 10/209 (5%) Strand=Plus/Plus Query 214128 GTTTTTCTGGTTGCTTTTGCGGCAAATGGCAT---CTTTGTATGCGATGAAAGGCATTCC 214184 ||| ||||||||||| |||||| |||||| | ||||| ||||| || |||| Sbjct 724200 GTTCTTCTGGTTGCTCTTGCGGT---TGGCATGGTCCTTGTAGAGCATGAACGGGTTTCC 724256 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 |||| ||||| | |||||| || ||| || | || ||||| || | ||| Sbjct 724257 GGTCTCGGTCTGAGCCTCTAGAATGGCATACCAAAGCTTCTGAGCCTTAAC--CGTTTGG 724314 Query 214245 GG--CTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACA 214302 | | | |||||| |||||||| || || || | |||||| || ||||||||| Sbjct 724315 CGGCCGCGACCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCAAACTCATCGCCGTAGACA 724374 Query 214303 TCATCAAGACCGGGAGCCTCGTTGGGGCA 214331 || ||||||||||| |||||||||||| Sbjct 724375 TCGGCAAGACCGGGACACTCGTTGGGGCA 724403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729596028176