Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq21 185 8e-42 seq45 140 3e-28 seq32 82.4 7e-11 >seq21 Length=742638 Score = 185 bits (204), Expect = 8e-42 Identities = 180/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || |||||||||||||| ||||| ||||||||| Sbjct 188095 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 188036 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || |||||||||||||||||||| ||||| ||||| ||||| | ||| Sbjct 188035 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGG 187976 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| || | || | |||||||| ||||||| Sbjct 187975 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGCTAGACTCCA 187918 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || |||||||| || ||||| ||||||||||||||| Sbjct 187917 CCTCGAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 187868 >seq45 Length=386842 Score = 140 bits (154), Expect = 3e-28 Identities = 173/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | |||| || || |||||||||||||| ||||| |||||||| Sbjct 238404 GCCACCGCGCAGACGCAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 238463 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || || || ||||| |||||||| |||| ||| || ||||| | || Sbjct 238464 CAAGGTGCGACCATCTTCAAGTTGCTTTCCGGCGAAAATCAAGCGTTGCTGGTCAGGAGG 238523 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811 || | ||||||||| ||| | || | ||| || | || | || ||| ||||| Sbjct 238524 AATACCTTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTATCGGAGGACTC 238580 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || || || ||||| || || ||||| ||||| ||||||||| Sbjct 238581 CACCTCCAAGGTGATAGTCTTACCGGTGAGAGTCTTGACGAAGATCTGCATG 238632 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||||| ||||||||||||||| |||||| || || || |||| || Sbjct 237911 CACCAAGTGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGCTTAGAGTTCGTCCGTCCTC 237970 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||| || || || || || ||||| ||||| | || | || |||||||| Sbjct 237971 TAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTG 238030 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||||| |||| || | | | ||||| || || ||||||| || || || | Sbjct 238031 AATTTTGCTCTTC-ACATTGTCGATCGTGTCTGATGATTCGACCTCCAAGGTGATGGTCT 238089 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || ||||| ||||| || ||||| Sbjct 238090 TTCCGGTAAGAGTCTTGACGAAGATTTGCAT 238120 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || || ||| ||||| || ||||| |||||| | Sbjct 238122 CCACCACGAAGGCGCAGGACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTG 238181 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||| |||||||||||||| |||| ||||| ||||| | || Sbjct 238182 AGGGTTCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGAGGG 238241 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || || |||||| ||| || ||| || | | | ||||||| |||||||| Sbjct 238242 ATGCCTTCTTTGTCCTGGATCTTCGACTT-GACATTGTCAATAGTGTCGGAGGACTCCAC 238300 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 ||| | || || || || || || || ||||| || Sbjct 238301 CTCGAGGGTGATGGTCTTTCCAGTTAGGGTCTTGAC 238336 >seq32 Length=585458 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| ||||| ||||||||||| ||||||| ||| | ||| || || ||| Sbjct 205801 CGCATCGCTCCTCGCTCCGGCCTCGCAGCCAAGCACTCCATCCAAACGGGTGCGGGCGTC 205860 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||||||||||| |||||||| | || | ||| | || ||||||||| |||| Sbjct 205861 ATCGACGCCGATTACCGCGGGCAAGTGAAGATCCTCCTATTCAACCACAGCGA 205913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303399004800