Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq438317 95.1 1e-14 >seq438317 Length=14545 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/242 (70%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 17351 AGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAA 17410 |||||||| || || || || || || || || ||||| || | |||||| ||||||| Sbjct 3416 AGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAA 3475 Query 17411 TATTTTTC-GTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469 | |||| || | ||| | | |||||| ||||||||| || | ||||||||| Sbjct 3476 TGCCTTTCTGTAGATTTTAATTTCCC-CCAGTCAGCTAAATCTTTTGAGAGATCCACTTC 3534 Query 17470 TTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTG 17529 ||| | |||||||| || ||||||| || ||||| | |||||||||| || | Sbjct 3535 TTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTC 3594 Query 17530 TATGGGGAATACAACATATCTATCTAAGGAT--TCCTTTAACACGGGCTCGTCTTCCATT 17587 |||||||| | ||| ||| ||| ||||| || |||| ||| || ||||| | | Sbjct 3595 GATGGGGAAAATTACAAATC-GTCT-AGGATTATCTCGCAACAAGGGTTCATCTTCAACT 3652 Query 17588 TT 17589 || Sbjct 3653 TT 3654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485285850621000