Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq438317 113 4e-20 >seq438317 Length=14545 Score = 113 bits (124), Expect = 4e-20 Identities = 173/243 (71%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 16587 CCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGA 16646 |||| || ||||| || ||||| ||||| ||||||||||| || | || ||| ||||| Sbjct 3414 CCAGATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGA 3473 Query 16647 AATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTT 16706 ||| |||| |||| | | | ||| || ||||||||| || | |||||||| Sbjct 3474 AATGCCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTT 3533 Query 16707 CTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATT 16766 |||| | |||||||| || ||||||| || ||||||| |||||||||| || | Sbjct 3534 CTTCAGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACT 3593 Query 16767 GTATGGGAAATACGACGTATCTATCTAAGGAT--TCCTTTAACACGGGTTCATCTTCCAT 16824 ||||| || | || ||| ||| ||||| || |||| |||||||||||| | Sbjct 3594 CGATGGGGAAAATTACAAATC-GTCT-AGGATTATCTCGCAACAAGGGTTCATCTTCAAC 3651 Query 16825 TTT 16827 ||| Sbjct 3652 TTT 3654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479536821729000