Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq438317 113 5e-20 seq326921 111 2e-19 seq28755 111 2e-19 seq17242 107 2e-18 seq70167 105 7e-18 seq780981 95.1 1e-14 seq2444859 93.3 5e-14 seq4470012 87.8 2e-12 seq4386908 82.4 8e-11 seq2861173 82.4 8e-11 seq314876 82.4 8e-11 >seq438317 Length=14545 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24521 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 24580 ||||||||| || || || ||||| || |||||||| || | | ||| || |||| Sbjct 3418 ATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATG 3477 Query 24581 TTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 24640 |||| | | ||| ||| ||| ||| | |||||| || | |||||||||||| Sbjct 3478 CCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTC 3537 Query 24641 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 24700 | |||||||||||||| |||||||| || ||||| | ||| || ||| |||| | || Sbjct 3538 AGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGAT 3597 Query 24701 TGGAAAAATAACAAATC 24717 || ||||| ||||||| Sbjct 3598 GGGGAAAATTACAAATC 3614 >seq326921 Length=5948 Score = 111 bits (122), Expect = 2e-19 Identities = 232/343 (68%), Gaps = 16/343 (5%) Strand=Plus/Minus Query 24341 TTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTT 24400 |||||| | |||| || |||| |||||||| | | |||| | ||||| Sbjct 5168 TTTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCG 5109 Query 24401 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 24460 || |||||||||| | | |||||| ||||| || |||||||| ||||| || || ||| Sbjct 5108 AATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGCATTTTA 5049 Query 24461 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAA 24520 ||| | || | | || || ||| ||||||| | ||||||||| |||| Sbjct 5048 AAACGC------AC-TGT-GCTTCAAGAATTTGTACTTTGTGAATGAATCGTTCTACTAA 4997 Query 24521 ATTTT-CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 24579 ||||| || |||||||||| ||||| ||||||||||| | || | | ||| || |||| Sbjct 4996 ATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAAT 4937 Query 24580 ATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTT 24639 | | ||| | || |||| | ||||| || ||| | ||| ||||||| Sbjct 4936 ACTGTTCATTGACCGTAAGTTGTTCCCAATGAT-------TTTTCCCAAATCAACTTCTT 4884 Query 24640 CCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 24682 | || |||||||| | || | || || |||||||| |||| Sbjct 4883 CTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCA 4841 >seq28755 Length=37593 Score = 111 bits (122), Expect = 2e-19 Identities = 278/414 (67%), Gaps = 15/414 (4%) Strand=Plus/Minus Query 71573 TTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTCAATAT 71632 || || ||||||| || ||||||||| | || | | |||||||||||| || || || Sbjct 16043 TTCTCCGGTAAAACCACCGAATTAATTCGGAGAATAAAACGTTATCAAATTGCA-AAGAT 15985 Query 71633 -AAATGCGTGACTATAAAATATTCTAACGATAATAGATACGG---AACGGGACTATGGAC 71688 |||||| | | || || |||| |||| ||||||||||| | || | | || | Sbjct 15984 GAAATGCCTTATTAGAAGATATGCTAATGATAATAGATATAGCTCAAATGCATTAG---C 15928 Query 71689 GCATGATA-AGAATAATTTTGAAGCATTGGAAGCAACTAAACTATGCGATGTCTTGGAAG 71747 ||||| | || | ||| | ||| | || || ||| || || | || | | Sbjct 15927 ACATGACGGACAAACACTTTCA-GCAATTTCCGCTACAAAATTA----ATTTATTTAATG 15873 Query 71748 CAATTACAGATTTCTCCG-TGATAGGTATTGATGAAGGACAGTTCTTTCCAGACATTGTT 71806 || | || || | | || ||||| || |||| |||||| |||||||||||||| Sbjct 15872 CACGTTATGAATTATGATATTATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTA 15813 Query 71807 GAATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGATGGG 71866 || || ||||| || ||||||||||| |||| | ||| || |||| Sbjct 15812 ACGTTTGCAGAAGAAATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGA 15753 Query 71867 ACATTTCAACGTAAACCGTTTAATAATATCTTGGATCTTATTCCATTATCTGAAATGGTG 71926 ||||||| | | || | || ||||||||| |||| ||||||||| | |||| ||| Sbjct 15752 ACATTTCGAAGAGAAGCTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTG 15693 Query 71927 GTAAAACTAACTGCAGTGTGTATGAAATGCTTTAAGGAGGCGTCCTTTTCTAAA 71980 |||||| || ||| || |||||| || ||| | ||||| || ||| | ||| Sbjct 15692 GTAAAATTATATGCTGTCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq17242 Length=2525 Score = 107 bits (118), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 24162 TCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 24221 || ||||| || | ||| || || || || || ||||| || || | || |||||| Sbjct 2213 TCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAGC 2154 Query 24222 CAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATA 24281 |||||||| |||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 2153 CAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGCT 2094 Query 24282 AGTCTTTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 24338 | |||||| ||| | || ||| || ||||| || ||||||| | |||||| Sbjct 2093 ACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTTC 2034 Query 24339 TTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 || || | ||| || | || || || ||||| || || Sbjct 2033 TTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq70167 Length=66857 Score = 105 bits (116), Expect = 7e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 53759 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 53818 || || || || |||||||| ||||||||||||||||| ||||| ||||| || | Sbjct 49987 ATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTTGCTGATTTGATTTACGG 50046 Query 53819 TTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATC 53878 ||||| ||||| ||||| || ||| | || || |||||||||||||| || || ||||| Sbjct 50047 TTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAATCTGAGAGTCAATAATG 50106 Query 53879 GCTTTCCA 53886 || | ||| Sbjct 50107 GCATACCA 50114 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 ||| ||||| |||||||| |||||||| || | || | ||| || || || || || | Sbjct 30007 TACCTGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAAT 30066 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 ||||||||||||||| | ||| || ||||| || || || ||||| || || | | || Sbjct 30067 AGACTCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAA 30126 Query 53269 ACTATTTCTAAGACC 53283 ||| || || | ||| Sbjct 30127 ACTGTTCCTTACACC 30141 >seq780981 Length=1727 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| || ||||| || | ||| || || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 ||||||||||||| || ||||| || ||||| |||||||||||||| || || ||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 24277 CAATAAGTCTTTCTCCA 24293 || | |||||| ||| Sbjct 28 CAGCTACTCTTTCACCA 12 >seq2444859 Length=247 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 52883 TAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 52942 ||||| ||||||||||| ||||| |||| | || || || ||||| | ||||| ||| Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 52943 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA 53002 || |||||||| || | || || | ||| || |||||||| | | | ||||||||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 53003 ATTTCCCAAATAGT 53016 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 >seq4470012 Length=581 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 71540 GGCGGGCATATTCAGTTGATAATTGGCCCCATGTTTTCAGGTAAAAGTACAGAATTAATT 71599 || || || || || | ||| | || | ||||||||| || |||| |||||||||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 71600 AGACGAGTTAGACGTTATCAAATAGCTCAAT-ATAAATGCGTGACTATAAAATATTCTAA 71658 | ||| | | ||| |||||||| | | ||| |||| ||| | | ||||||||| || | Sbjct 177 CGGCGATTGAAACGGTATCAAATTG-TAAATCATAAGTGCCTAATTATAAAATACGCTCA 235 Query 71659 CGATAATAGATA 71670 |||||||||||| Sbjct 236 CGATAATAGATA 247 >seq4386908 Length=540 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 71568 CCATGTTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTC 71627 |||||||||| || || | |||||||||||| | ||| | | ||| |||||||| || Sbjct 291 CCATGTTTTCTGGAAATACGACAGAATTAATTCGGCGATTGAAACGGTATCAAATTGCAA 350 Query 71628 AATATAAATGCGTGACTATAAAATATTCTAACGATAATAGATA 71670 | |||||| | | | ||||||||| || ||||||||||||| Sbjct 351 ATCATAAATACCTAATTATAAAATACGCTCACGATAATAGATA 393 >seq2861173 Length=269 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 71773 TATTGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGCAAACG 71831 ||| ||||||| |||||| ||||||||||| | ||| | || ||| ||||| || Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGCCAATC 211 Query 71832 AAGGAAAAATAGTTATAGTAGCCGCACTCGATGGGACATTTCAACGTAAACCGTTTAATA 71891 |||||||||| |||| | ||| || | || || |||| | | ||| | || | Sbjct 210 AAGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAA 151 Query 71892 ATATCTTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTGTATGA 71951 |||| || || | ||||| ||| | |||| ||||||||| || ||| || |||||| Sbjct 150 ATATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGT 91 Query 71952 AATGCTTTAAGGAGGCGTCCTTTTCTAAA 71980 || ||| | || || || ||| | ||| Sbjct 90 CGTGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq314876 Length=46846 Score = 82.4 bits (90), Expect = 8e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 71768 ATAGGTATTGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGC 71826 || ||||| || |||| |||||| ||||||||||| || || | || ||| ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCGT-GACGTTTGCTGAAGAAATGGC 32888 Query 71827 AAACGAAGGAAAAATAGTTATAGTAGCCGCACTCGATGGGACATTTCAACGTAAACCGTT 71886 || ||||||||||| |||| | ||| | || || || |||| | | || | || Sbjct 32889 CAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGAAGCTTT 32948 Query 71887 TAATAATATCTTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTG 71946 ||||||||| || | ||||| ||| | |||| ||||||||| || ||| || | Sbjct 32949 CGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTA 33008 Query 71947 TATG 71950 |||| Sbjct 33009 TATG 33012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556713633906000