Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq197271 91.5 1e-13 seq990654 84.2 2e-11 >seq197271 Length=6114 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 29045 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 29104 ||||||| ||||||||||| | || ||||| ||| | || || ||||| || || Sbjct 1444 AAAAATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTCATTTTTGCAGGAAA 1503 Query 29105 ACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| |||||||| || ||| | | ||||||||||||||||| |||||||||||||| Sbjct 1504 ACAGTTGGAAGATGGCAGAACACTCTCTGATTACAATATTCAGAAAGAATCTACTCTTCA 1563 >seq990654 Length=1195 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 28989 GGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAA 29048 || ||||||||||| ||| ||||||| || || | | || | ||| |||| Sbjct 987 GGTAAAACCATTACTCTTGAAGTGGAACCCAGTGACACTATTGAGAATGTGAAGGCAAAA 1046 Query 29049 ATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAA 29108 ||| ||||||||||| | || ||||| ||| | ||||| ||||| || || || Sbjct 1047 ATTCAAGATAAAGAAGGCATTCCACCTGATCAGCAACGTCTTATTTTTGCTGGAAAGCAG 1106 Query 29109 CTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||||||||| || ||| | | || |||||||||||||| || || ||||| || Sbjct 1107 CTGGAAGATGGCAGAACACTCTCAGACTACAATATTCAGAAAGAGTCAACTCTCCA 1162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402304358131625