Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq215054 111 1e-19 seq1187548 107 2e-18 seq3343411 105 5e-18 seq2361161 95.1 1e-14 seq2837514 87.8 1e-12 seq2535487 87.8 1e-12 seq2316783 86.0 5e-12 >seq215054 Length=1089 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| ||| | || || |||||||| ||||||||||| | ||||| | | ||||| Sbjct 630 ACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTACGTCCATCCTCT 689 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 ||||||||||||||| | ||||| ||||| || || ||| | |||||| || || | Sbjct 690 AGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATGCCTTCTTTATCTTGG 749 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || || ||| || | | | || |||| || ||| ||| | |||||| |||||| Sbjct 750 ATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCAAGGGTAATAGTCTTG 809 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || || ||||| || ||||| Sbjct 810 CCAGTCAAGGTCTTCACAAAGATCTGCAT 838 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 20980 TGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCG 21039 |||| ||||| |||||||| ||||||| || || || | || |||| ||| || || | Sbjct 175 TGGATTCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTG 234 Query 21040 CATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCA 21099 || |||| || | |||||||| || | ||||| || || ||||| || | Sbjct 235 CAAAAATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATCCTGTATCTTGGCCTTGA 294 Query 21100 CCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTT 21159 | | | | || |||| ||||||| ||||| ||| ||||||||||| || | || | Sbjct 295 CATTTTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCT 354 Query 21160 TGACAAATATTTGCAT 21175 | || || || ||||| Sbjct 355 TTACGAAGATCTGCAT 370 >seq1187548 Length=1734 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||||||||||||| |||||||| ||||| || | || ||| | | || Sbjct 596 AGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCT 537 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||||||||| ||| |||| || ||||| ||||| || | ||||| || || Sbjct 536 TCCAACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCC 477 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| || ||||| | | | || |||| || ||| || | || |||||| Sbjct 476 TGGATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTC 417 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | ||||| ||||| |||||||| Sbjct 416 TTGCCAGTGAGTGTTTTAACAAAGATTTGCAT 385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||||||||||||| |||||||| ||||| || | || ||| | | || Sbjct 1727 AGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCT 1668 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| |||||| || ||| | || |||||||| || || ||| | |||||| || || Sbjct 1667 TCCAACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCC 1608 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| ||||| | | | || |||| || ||| ||| | || || || Sbjct 1607 TGAATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTT 1548 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || | || || ||||| || |||||| Sbjct 1547 TTACCAGTCAGTGTCTTCACAAAGATCTGCATT 1515 >seq3343411 Length=310 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || | ||| | |||| ||| | || || |||||||| ||||||||||| | Sbjct 92 CCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAG 151 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||||||||| ||| | ||||| |||||||| || ||| Sbjct 152 AGGGTGCGTCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGGGA 211 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || ||| || ||| || | | | || |||| || ||| | Sbjct 212 ATGCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCACT 271 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAA 21166 || | |||||||||||| || |||| || || ||||| Sbjct 272 TCAAGGGTAATGGTCTTACCAGTTAGAGTCTTCACAAA 309 >seq2361161 Length=242 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | || |||| ||| | ||| |||||||| || ||| | || || | Sbjct 220 TTCCTCCGCGAAGTCGAAGAACCAAATGTAGAGTAGACTCCTTCTGGATGCTGTAATCAG 161 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| | | || |||||||||||||| ||| | || || ||||||||||| | Sbjct 160 ACAAGGTGCGTCCATCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTG 101 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||| || || ||| || |||||| | | | || |||| || ||| Sbjct 100 GAATGCCTTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATCGTGTCACTTGGTTCCA 41 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAA 21166 || | || ||||||||||| |||| |||||||| || Sbjct 40 CCTCAAGTGTGATGGTCTTGCCAGTTAGTGTTTTGACGAA 1 >seq2837514 Length=268 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||| | || ||| || | || ||||| ||||| || Sbjct 5 GTGGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTTCGGCCATCTTCCAGTTGTTTCCCT 64 Query 21039 GCATAAA-TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| ||| | || | ||||| || || | ||||||||| || |||||| || Sbjct 65 GCAAAAAATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGATCTTAGCCTT 124 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | | || |||| | |||| ||||| ||| || |||||||| || | || Sbjct 125 GACATTTTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTATTGTCTTGCCAGTCAGGGT 184 Query 21158 TTTGACAAATATTTGCAT 21175 || |||||||||||||| Sbjct 185 CTTTACAAATATTTGCAT 202 >seq2535487 Length=251 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || | ||| | |||| ||||| || ||||||||||| ||||||||||| | Sbjct 129 CCACCACGTAACCTCAAGACCAGATGCAGCGTCGACTCCTTTTGGATGTTATAGTCTGAG 70 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 || || || | ||||| ||||||||||| ||| | ||||| |||||||| || Sbjct 69 AGAGTGCGGCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATC 17 >seq2316783 Length=240 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| ||| || ||||||||||||||||| || | ||| || | |||| Sbjct 145 AGCACAAGATGCAGAGTTGATTCCTTTTGAATGTTATAATCTGACAGCGTGCGACCGTCT 86 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| ||||||| | ||||||||| || | |||||||| || Sbjct 85 TCAAGCTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCAGGAGGAATACCTTCCTTATCT 26 Query 21084 GCGATCTTTTGTTTCAC 21100 ||||| |||||| Sbjct 25 TGAATCTTAGCTTTCAC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396596868862700