Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2837514 93.3 4e-14 seq215054 93.3 4e-14 seq2361161 91.5 1e-13 seq4730498 89.7 5e-13 seq3343411 84.2 2e-11 seq438317 84.2 2e-11 >seq2837514 Length=268 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/201 (71%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| ||||| || || || ||||| || || ||| | || || || | | Sbjct 202 ATGCAAATATTTGTAAAGACCCTGACTGGCAAGACAATAACCCTGGAAGTGGAGACTAGT 143 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||||| || || | || || || |||||||| | || ||| Sbjct 142 GACACCATTGAAAATGTCAAGGCTAAGATCCAAGATAAGGAAGGCATCCCTCCTGATCAG 83 Query 40810 CAACGACTCA-TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || | | | || || ||||| ||||| || | || || || |||||||| Sbjct 82 CAACGTCTGATTTTTTGCAGGGAAACAACTGGAAGATGGCCGAACACTTTCTGACTACAA 23 Query 40869 CATCCAGAAGGAGGCCACGCT 40889 |||||||||||| |||| || Sbjct 22 CATCCAGAAGGAATCCACCCT 2 >seq215054 Length=1089 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || || ||||| ||||| ||| | || || || ||| Sbjct 370 ATGCAGATCTTCGTAAAGACCCTGACTGGCAAGACCATAACCCTGGAAGTGGAGCCCAGT 311 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||||| || || | || ||||| || || || | |||||| Sbjct 310 GACACCATTGAAAATGTCAAGGCCAAGATACAGGATAAAGAAGGTATACCGCCAGACCAG 251 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | || || || ||| |||| || | || || || ||||||||| Sbjct 250 CAACGTCTGATTTTTGCAGGAAAGCAGTTGGAAGATGGCCGTACACTTTCGGACTACAAC 191 Query 40870 ATCCAGAAGGA 40880 || |||||||| Sbjct 190 ATTCAGAAGGA 180 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| || || ||| | || || ||| | | Sbjct 838 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAACCTAGT 779 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | || | ||||| | || ||||| ||||| ||| | || || Sbjct 778 GACACAATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCTGATCAA 719 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | |||||||||||||| || || | || |||||| ||||| ||| Sbjct 718 CAGAGGCTTATATTTGCGGGCAAACAGCTAGAGGATGGACGTACCCTCTCAGACTATAAC 659 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| ||||| | || || ||||| || ||| Sbjct 658 ATCCAAAAGGAATCAACACTTCATCTGGTCTTG 626 >seq2361161 Length=242 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| ||||| || || ||||| |||||||| | || || ||| | | |||| | Sbjct 1 TTCGTCAAAACACTAACTGGCAAGACCATCACACTTGAGGTGGAACCAAGTGACACGATA 60 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 ||| | || | ||||| | || ||||| ||||| || | |||||||| | || Sbjct 61 GAAAATGTGAAAGCCAAAATCCAGGATAAAGAAGGCATTCCACCAGACCAGCAGAGGCTG 120 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | || |||||||||||||| || | |||||| | || |||| |||||||||| Sbjct 121 ATATTTGCTGGCAAACAGCTGGAAGATGGACGCACCTTGTCTGATTACAGCATCCAGAAG 180 Query 40879 GAGGCCACGCTGCAT 40893 ||| | || || ||| Sbjct 181 GAGTCTACTCTACAT 195 >seq4730498 Length=794 Score = 89.7 bits (98), Expect = 5e-13 Identities = 168/242 (69%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || |||||||||||| | || || ||| | | Sbjct 675 ATGCAGATTTTTGTGAAAACCCTCACAGGGAAAACCATCACCCTAGAGGTTGAACCTTCT 616 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | || ||||| | || | |||||||| |||||||| ||||| | | || || Sbjct 615 GATACAAATGGAAACG-TGAAAGCAAAAATTCAGGACAAAGAAGGCATTCTTCCTGATCA 557 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | | || || || | || || | ||||| || |||||||| Sbjct 556 GCAGCGCTTGATTTTTTCTGGAAAGCAATTCGAAGATGGTCGCACACTTTCTGACTACAA 497 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTTGCATGA 40928 ||| ||||||||| | || || | || || | |||||||| || || | |||| ||| Sbjct 496 CATTCAGAAGGAGTCAACTTTGAACCTTGTCCTTCGCTTGAGAGGTGGTG--TTGC-TGA 440 Query 40929 AC 40930 || Sbjct 439 AC 438 >seq3343411 Length=310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 || || || || || || || || ||||| ||| | || || ||| | | |||| | Sbjct 309 TTTGTGAAGACTCTAACTGGTAAGACCATTACCCTTGAAGTGGAACCTAGTGACACGATA 250 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 ||| | || | ||||| | || ||||| ||||| ||| | || ||||| | || Sbjct 249 GAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAGCAGAGGCTT 190 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | || ||||||||||| || || | ||||||||| ||||| |||||||| ||| Sbjct 189 ATATTTGCAGGCAAACAGCTAGAGGATGGACGCACCCTCTCAGACTATAACATCCAAAAG 130 Query 40879 GAGGCCACGCTGCATCTAGTGTTG 40902 || | || || ||||| || ||| Sbjct 129 GAATCAACACTTCATCTGGTCTTG 106 >seq438317 Length=14545 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/226 (69%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 116583 TGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGC 116642 || |||| || || || | || || || ||||||||||| | || || || || |||| Sbjct 3635 TGTTGCGAGATAATCCTAGACGATTTGTAATTTTCCCCATCGAGTATCCTGATATTTGGC 3576 Query 116643 GCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGG 116702 |||||||| ||||| || || || || ||||| | || || ||||| || || || | Sbjct 3575 AAATGTACAAGAAGGCAGAAGCATCATTTTGGACTGCTGAAGAAGTGGATCTCTCAAAAG 3516 Query 116703 ACACGAGC-GACTGGGAGCGCTTGAA--CGACAACGAGCGCCATTTCATCAAGCACGTGC 116759 | ||| ||||||| | || || | ||| || | |||||||| ||| | | Sbjct 3515 A-TTTAGCTGACTGGGGGAAATTAAAATCTACA--GAAAGGCATTTCATTTCGCATATCC 3459 Query 116760 TGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGT 116805 | |||||||| || || || || || || || || || |||||||| Sbjct 3458 TAGCCTTTTTTGCTGCTAGTGATGGTATTGTTAATGAAAATCTGGT 3413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483104460222000