Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq47141 98.7 8e-16 seq1187548 93.3 3e-14 seq329421 91.5 1e-13 seq4730498 87.8 1e-12 seq420093 84.2 2e-11 >seq47141 Length=13405 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | ||||| ||| || || || |||||| Sbjct 4973 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCAAGTTGCTTTCCA 5032 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | |||||||||| ||||| ||||| |||||| | ||||||| ||| Sbjct 5033 GCAAAAATCAAGCGCTGCTGATTAGGAGGAATGCCTTCCTTGCTTTGAATTTTTACTTTC 5092 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 | | ||| | || || | || ||||| | ||| | ||||| || || || ||| Sbjct 5093 CCATTTTCAATTGTATCGGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTT 5152 Query 118722 TTTACAAAAATCTGCATGG 118740 || |||||||||||||||| Sbjct 5153 TTCACAAAAATCTGCATGG 5171 >seq1187548 Length=1734 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || |||||||||||||| || ||||| || ||||| ||| || Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | |||||||||||| |||| || | ||| ||||| || || ||||| || || || | Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | ||| | ||||| | || | || || || | || | ||||| Sbjct 1604 ATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGT-TCCACTTCAAGAGTTATTGTTTT 1546 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| || || ||||| |||||||| Sbjct 1545 ACCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 >seq329421 Length=21321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || ||||||||||| ||||| || |||||| ||| || ||||| |||||| Sbjct 18641 GTAGATTCCTTTTGAATGTTATAATCTGACAGAGTGCGACCATCTTCAAGCTGCTTTCCA 18700 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || | || |||||||||||||| ||||| || || ||||| ||| Sbjct 18701 GCAAAAATCAGACGCTGCTGATCAGGAGGAATACCTTCCTTATCT 18745 >seq4730498 Length=794 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | ||||| ||| |||| || |||||| Sbjct 479 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCGAATTGCTTTCCA 538 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 | | || | ||||||||||| ||| | ||||| || ||||| ||||||| ||| Sbjct 539 GAAAAAATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTCCTGAATTTTTGCTTTC 598 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | | | || || | || ||||| | ||| | ||||| || || || ||| Sbjct 599 ACGTTTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTT 658 Query 118722 TTTACAAAAATCTGCATG 118739 || ||||||||||||||| Sbjct 659 TTCACAAAAATCTGCATG 676 >seq420093 Length=5408 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| || ||||| |||||||| | ||||||||||||||||| ||||| || || || || Sbjct 3709 ATCTTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCAGGAGGAATACCTTCTTT 3768 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 || ||| ||| || || | ||| | || || | | || ||||| | || | Sbjct 3769 ATCCTGAATCTTTGCCTTCACATTTTCAATAGTATCACTTGTTTCAACCTCAAGTGTTAT 3828 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || | |||||| |||||||||||||| Sbjct 3829 AGTCTTCCCAGTTAAAGTTTTCACAAAAATCTGCAT 3864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407464842109900