Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq16857 141 2e-28 seq4224909 102 1e-16 >seq16857 Length=150560 Score = 141 bits (156), Expect = 2e-28 Identities = 234/338 (69%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 135601 GATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTT 135660 ||| | || || ||| || | |||||| |||| | ||||| || |||||||| ||||| Sbjct 113818 GATGAGGATGAATGGTCTGCATGGAAAGAAATGTCTGATCCAGTCTTGCATATTGAACTC 113877 Query 135661 AGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATA 135720 ||||||||||| || | | | ||||| || | || || ||||| || || | Sbjct 113878 AGGAGATGGGCAGACCTGCTGCTGATAGCACCAATGGATGCTAACACGTTGGCTAAGGTG 113937 Query 135721 GCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAA 135780 |||||||| | || |||||||| |||| | || || | || ||||||| | | ||| Sbjct 113938 GCTAATGGACTGTGTGATAATTTGTTGACTTGTACAGTCCGTGCATGGGATAGACATAAA 113997 Query 135781 CCACTCATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAA 135840 ||||| || || |||||||| ||||| || ||||||||| |||||||| || | Sbjct 113998 CCACTAATGTTTTGTCCTGCGATGAACACATATATGTGGGATCATCCTATAACTTCCACT 114057 Query 135841 CATATAGATACGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTA 135900 ||| | | |||||| || | || | || ||||| || | | |||| ||| Sbjct 114058 CATGTCAAGCTGTTAAAGGATCTTGGATATATTGAAATTCCTTGTGTTGCAAAACGACTT 114117 Query 135901 GCATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGT 135938 || ||||| || |||| |||||| ||||| ||||| Sbjct 114118 GCTTGTGGTGAAATAGGTTATGGTGGGATGGCTGAAGT 114155 >seq4224909 Length=478 Score = 102 bits (112), Expect = 1e-16 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 189470 CAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATA 189529 |||||||| |||||||| || |||||| ||||| | |||||||||||||| || ||||| Sbjct 247 CAGATGGTAAGAGAAGGGAAGATGCATGGTTTTCTTCGAATGTATTGGGCAAAAAAGATC 306 Query 189530 CTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAG 189589 | || ||||| | || |||||||| ||||| || | ||| ||| | || |||| Sbjct 307 TTGGAGTGGACCAAAAGTCCTGAAGAAGCTTTAAGCATTGCTATTTATCTTAATGACAAA 366 Query 189590 TACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 || ||||| || ||| || || || || || || ||| Sbjct 367 TATGAACTCGATGGCCGTGACCCAAATGGTTATGTTGGT 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 865651923963000