Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4250481 107 2e-18 seq4178852 105 7e-18 seq3001634 105 7e-18 seq1197459 104 3e-17 seq729279 104 3e-17 seq1614370 102 9e-17 seq1494035 102 9e-17 seq1187548 102 9e-17 seq1126925 102 9e-17 seq240256 102 9e-17 seq3592088 100 3e-16 seq2651331 100 3e-16 seq1558861 100 3e-16 seq119175 98.7 1e-15 seq4599602 96.9 4e-15 >seq4250481 Length=487 Score = 107 bits (118), Expect = 2e-18 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| || |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 409 AAAAAATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 468 Query 60117 TCACCACTATACTACCGAG 60135 | ||||||||||||||||| Sbjct 469 TGACCACTATACTACCGAG 487 >seq4178852 Length=463 Score = 105 bits (116), Expect = 7e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 95 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 36 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 35 ATACTACCGAGGA 23 >seq3001634 Length=280 Score = 105 bits (116), Expect = 7e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 280 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 221 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 220 ATACTACCGAGGA 208 >seq1197459 Length=1279 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1203 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1262 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 1263 TACTACCGAGGA 1274 >seq729279 Length=5823 Score = 104 bits (114), Expect = 3e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 3166 AAAAAACGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 3225 Query 60117 TCACCACTATACTACCGAGG 60136 | |||||||||||||||||| Sbjct 3226 TGACCACTATACTACCGAGG 3245 >seq1614370 Length=216 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 || || | ||||| |||| ||||||||||||| |||||||||| |||||||||| |||| Sbjct 101 AACAAATGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCCTGACAGGCGGGGATAC 160 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 161 TGACCACTATACTACCGAGGA 181 >seq1494035 Length=211 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 || || | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 16 AACAAATGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 75 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||| Sbjct 76 GGACCACTATACTACCGAGGA 96 >seq1187548 Length=1734 Score = 102 bits (112), Expect = 9e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||||||||| ||| ||| ||||||||||| ||||||| || || || | || || Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| || ||||| || || || | ||| ||||| | || | | || || ||| | Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 ||||| || | | | | ||||| || | |||||| || | |||||||| ||| Sbjct 473 ATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTG 414 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || || || |||||||||||||| Sbjct 413 CCAGTGAGTGTTTTAACAAAGATTTGCAT 385 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||||||||| ||| ||| ||||||||||| ||||||| || || || | || || Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 | ||| || ||||| || || |||| ||| || || | || | || || || ||| || Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCC-TG 1606 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | | || | || | | | | ||||| || | |||||| || | || || ||||| Sbjct 1605 AATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTT 1546 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || || ||||| |||||||| |||||| Sbjct 1545 ACCAGTCAGTGTCTTCACAAAGATCTGCATT 1515 >seq1126925 Length=1434 Score = 102 bits (112), Expect = 9e-17 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 60067 TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 60126 ||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct 290 TCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTAT 231 Query 60127 ACTACCGAGGA 60137 ||||||||||| Sbjct 230 ACTACCGAGGA 220 Score = 98.7 bits (108), Expect = 1e-15 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 996 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1055 Query 60126 TACTACCGA 60134 ||||||||| Sbjct 1056 TACTACCGA 1064 >seq240256 Length=50490 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 || |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 49666 TTACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCA 49725 Query 60123 CTATACTACCGAGG 60136 |||||||||||||| Sbjct 49726 CTATACTACCGAGG 49739 >seq3592088 Length=341 Score = 100 bits (110), Expect = 3e-16 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 70 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 11 Query 60126 TACTACCGAG 60135 |||||||||| Sbjct 10 TACTACCGAG 1 >seq2651331 Length=257 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGG-CAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 || || | ||||| ||| | ||||||||||||| ||||||||||||||||||||| ||| Sbjct 87 AACAAATGTCTCCCCGGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 28 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 27 CTGACCACTATACTACCGAGGA 6 >seq1558861 Length=214 Score = 100 bits (110), Expect = 3e-16 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 60068 CCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATA 60127 || |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct 214 CCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATA 155 Query 60128 CTACCGAGGA 60137 |||||||||| Sbjct 154 CTACCGAGGA 145 >seq119175 Length=17384 Score = 98.7 bits (108), Expect = 1e-15 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 10645 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 10704 Query 60126 TACTACCGA 60134 ||||||||| Sbjct 10705 TACTACCGA 10713 >seq4599602 Length=666 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 161 AAAAAAATGCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 102 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||| |||||| Sbjct 101 TGACCACTATACTAACGAGGA 81 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536174958141000