Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq197271 116 5e-21 seq4916 105 9e-18 seq4952844 104 3e-17 seq1107188 104 3e-17 seq990654 104 3e-17 seq329421 104 3e-17 seq1187548 98.7 1e-15 seq78634 95.1 2e-14 seq2976538 93.3 6e-14 seq21712 89.7 7e-13 seq2996346 87.8 3e-12 >seq197271 Length=6114 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| ||||| | || | ||| | |||||||||||| ||||| ||||| || Sbjct 1587 CCTCCTCTCAGTCTGAGGACAAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAG 1528 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| ||| || || |||||||| |||||||| | | ||||||||| || ||| Sbjct 1527 AGTGTTCTGCCATCTTCCAACTGTTTTCCTGCAAAAATGAGACGTTGCTGATCAGGTGGA 1468 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 1467 ATGCCTTCTTTATCTTG 1451 >seq4916 Length=195441 Score = 105 bits (116), Expect = 9e-18 Identities = 117/152 (77%), Gaps = 8/152 (5%) Strand=Plus/Minus Query 25890 TTTATAAATATAATTAAAAATTATATAAAATGTCTT---TAATTGATGTGTGTTATGAAC 25946 |||||||| ||| | ||| |||| ||||||||| ||| ||| | |||||||||| Sbjct 158082 TTTATAAA-ATA--TGAAA--TATAATAAATGTCTTCATTAAAAGATATATGTTATGAAC 158028 Query 25947 ACATTAAAGACTCATATTATTATGGTCTCTTTGGTGATTTTAAATTAGTTATAGATAAAA 26006 | || ||||| || | ||||| |||||||| |||||||| | || |||||||||| Sbjct 158027 AAATCAAAGATAATTACTGGTATGGACTCTTTGGAGATTTTAAGCTGGTAATAGATAAAA 157968 Query 26007 CAACAGGTTGTTTTAATGCTACTAAGTTATGT 26038 || || | |||||||||||||||||||||| Sbjct 157967 ATACGGGATATTTTAATGCTACTAAGTTATGT 157936 Score = 105 bits (116), Expect = 9e-18 Identities = 111/144 (77%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 95311 ATAAAATTAAANATATATAAAATGTCAC--TTAATA-ATATATGTTATGAACACATTAAA 95367 ||||||| | ||||| ||||||| |||| | |||||||||||||||| || ||| Sbjct 158079 ATAAAATATGAAATATAATAAATGTCTTCATTAAAAGATATATGTTATGAACAAATCAAA 158020 Query 95368 GACTCATATTATTATGGTCTATTTGGTGATTTTAAATTAGTTATAGATAAAACTACAGGT 95427 || || | ||||| || ||||| |||||||| | || |||||||||| ||| || Sbjct 158019 GATAATTACTGGTATGGACTCTTTGGAGATTTTAAGCTGGTAATAGATAAAAATACGGGA 157960 Query 95428 TGTTTTAATGCTACTAAATTATGT 95451 | ||||||||||||||| |||||| Sbjct 157959 TATTTTAATGCTACTAAGTTATGT 157936 Score = 98.7 bits (108), Expect = 1e-15 Identities = 97/125 (78%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 96450 AAATGTCTT---TAATTGATGTATGTTATGAACACATCAAAGACTCATATTATTATGGTT 96506 ||||||||| ||| ||| ||||||||||||| |||||||| || | ||||| Sbjct 158060 AAATGTCTTCATTAAAAGATATATGTTATGAACAAATCAAAGATAATTACTGGTATGGAC 158001 Query 96507 TATTTGGTGATTTTAAATTAGTTATAGATAAAACCACAGGTTGTTTTAATGCTACTAAAT 96566 | ||||| |||||||| | || |||||||||| || || | ||||||||||||||| | Sbjct 158000 TCTTTGGAGATTTTAAGCTGGTAATAGATAAAAATACGGGATATTTTAATGCTACTAAGT 157941 Query 96567 TATGT 96571 ||||| Sbjct 157940 TATGT 157936 >seq4952844 Length=1519 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| || || | || | ||| | || |||||||| |||||||||||||| Sbjct 222 CCTCCTCTCAGCCTGAGGACAAGATGAAGTGTGGATTCTTTCTGAATATTATAATCTGAG 163 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| ||| || || || |||||||||||||| | | || ||||| || ||| Sbjct 162 AGTGTTCTGCCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGCTGTTGATCAGGTGGA 103 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 102 ATGCCTTCTTTATCTTG 86 >seq1107188 Length=1186 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| || || || || | ||| | || |||||||| |||||||||||||| Sbjct 449 CCTCCTCTCAGCCTAAAGACAAGATGAAGTGTGGATTCTTTCTGAATATTATAATCTGAG 390 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| ||| || || || |||||||||||||| | | || || || || ||| Sbjct 389 AGTGTTCTGCCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCAGGTGGA 330 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 329 ATGCCTTCTTTATCTTG 313 >seq990654 Length=1195 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| ||||| | || | ||| | ||| || ||||| ||||| || ||||| Sbjct 1186 CCTCCTCTCAGTCTGAGGACAAGATGGAGAGTTGACTCTTTCTGAATATTGTAGTCTGAG 1127 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| ||| || | || |||||||||||||| | | ||||||||| || ||| Sbjct 1126 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAGGTGGA 1067 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 1066 ATGCCTTCTTTATCTTG 1050 >seq329421 Length=21321 Score = 104 bits (114), Expect = 3e-17 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATCAT 146126 ||| ||||| | ||||||||| ||| || || ||||||||||| ||||| | | ||| | Sbjct 18628 TACTAAATGCAGAGTAGATTCCTTTTGA-ATGTTATAATCTGACAGAGTGCGACCATCTT 18686 Query 146127 CTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTT 146186 | | || |||||||||||||||| | |||||||| |||||||| ||||| ||||||| Sbjct 18687 CAAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCTTCCTTATCTT 18746 Query 146187 G 146187 | Sbjct 18747 G 18747 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| || ||||| ||||| | || ||| ||||| || |||||||||||||||| | Sbjct 19139 ATATTGTAGTCTGACAGAGTACGGCCATCTTCTAACTGCTTTCCAGCAAAAATCAGACGC 19198 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||| || |||||||| ||||| |||||||| Sbjct 19199 TGCTGGTCAGGAGGAATACCTTCCTTATCTTG 19230 >seq1187548 Length=1734 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| ||||| || ||||| ||||||||||| || | || | | ||| || Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || |||||||||||||| |||| ||| || ||||| || ||||| ||||||||||| || Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTG 1606 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||||||| ||||| || ||||| ||||||||||| || | || | | ||| || Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || ||||| ||||||||||||| || || || || || ||||||||||||||||| || Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTG 475 >seq78634 Length=15123 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/152 (75%), Gaps = 5/152 (3%) Strand=Plus/Plus Query 96456 CTTTAATTGATGTATGTTATGAACACATCAAAGACTCATATTATTATGGTTTATTTGGTG 96515 ||||| || | | ||| |||||| |||||||| |||| |||||||||||||| | Sbjct 143 CTTTATTTCTTCTTTGTAATGAACGAATCAAAGATAACTATTGGTATGGTTTATTTGGAG 202 Query 96516 ATTTTAAATTAGTTATAGATAAAACCACAGGTTGTTTTAATGCTACTAAATTATGTAATT 96575 ||||||||||| ||||||||| || || | ||||||||| |||| |||||||| Sbjct 203 ATTTTAAATTA-AAATAGATAAAGAGACTGGATCTTTTAATGCCACTATGTTATGTAA-- 259 Query 96576 TATCAGGAAAAAGATTTAGAAATTGGATTAGA 96607 | || | ||| |||||| ||||| ||||| Sbjct 260 -AGAAGTAGGAAGTTTTAGACATTGG-TTAGA 289 >seq2976538 Length=278 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||||||| |||| ||| | ||| | || ||||| || || || || |||| Sbjct 256 TTCCTCCTCTAAGCCTTAGTACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTG 197 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | ||| |||| ||| || | || |||||||||||||| || | ||||| || |||| Sbjct 196 ACAAAGTCCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATTAAGCACTGCTGGTCTGGAG 137 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| ||||| || ||||| Sbjct 136 GAATGCCTTCCTTGTCTTG 118 >seq21712 Length=99785 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| |||| | || | ||| | ||||| |||||| ||||| ||||| || Sbjct 91297 CCTCCTCTCAGTCGGAGGACAAGATGAAGAGTAGTTTCTTTCTGAATATTGTAATCAGAG 91238 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || | ||||| || || || || |||||||||||| | | | ||||||||| || ||| Sbjct 91237 AGTGATCTGCCATTTTCCAACTGCTTTCCAGCAAAACTGAGACGTTGCTGATCAGGTGGA 91178 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 91177 ATGCCTTCTTTTTCTTG 91161 >seq2996346 Length=280 Score = 87.8 bits (96), Expect = 3e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 |||||||||||| ||||||||||||||||| ||||||| ||| || || || ||||| Sbjct 190 GTAGATTCTTTATGAATATTATAATCTGAAAGTGTTCTGCCATCTTCCAACTGCTTTCCT 249 Query 146141 GCAAAAATCAATCTTTGCTGATCCGG 146166 |||||||| || | ||| ||||| || Sbjct 250 GCAAAAATGAAGCGTTGTTGATCAGG 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 697180773024000