Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq215054 86.0 4e-12 seq34386 82.4 5e-11 >seq215054 Length=1089 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| || || |||| | || ||||||||||| ||||| || Sbjct 179 TTCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTGCAAA 238 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| || || |||||||| || | | || || || |||||| ||| | || Sbjct 239 AATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATCCTGTATCTTGGCCTTGACATT 298 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | || | | || || |||| || ||||| ||||| || || || || || Sbjct 299 TTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTTAC 358 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 359 GAAGATCTGCAT 370 >seq34386 Length=40806 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || ||| | || || || ||||| | | |||| Sbjct 32352 TCCTTCTGAATGTTGTAGTCAGAAAGTGTACGACCATCTTCAAATTGCTTTGCAGAGAAA 32411 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || | | |||||| || || | || |||||||| || ||||||||| | || Sbjct 32412 ATCAAGCTCTGCTGATCAGGAGGAATGCATTCCTTGTCCTGAAT-TTTTGCTTTCACATT 32470 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | ||||| | | ||| || || | ||||||||||| || ||||| |||||||| Sbjct 32471 TTCATTTGAATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGTTTTCAC 32530 Query 34378 AAAGATCTGCAT 34389 ||| ||||||| Sbjct 32531 AAAACTCTGCAT 32542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303437660132000