Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq215054 105 5e-18 seq1187548 102 6e-17 seq2837514 89.7 4e-13 >seq215054 Length=1089 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||||||||||| ||||| ||||| ||||| | | || | ||| || Sbjct 630 ACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGGGTACGTCCATCCTCT 689 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | |||||||||||| | ||||| || |||||||| ||| | |||||| ||||| Sbjct 690 AGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATGCCTTCTTTATCTTGG 749 Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | || || || | | ||| ||||||| || || ||||| ||| || | || Sbjct 750 ATTT-TAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCAAGGGTAATAGTCTT 808 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| ||||| || || ||||| || ||||| Sbjct 809 GCCAGTCAAGGTCTTCACAAAGATCTGCAT 838 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 18132 GATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCA 18191 ||||| || |||||||||||||| | | ||| | ||||||||| || || || ||| Sbjct 177 GATTCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTGCA 236 Query 18192 TAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTG--CTTGA 18249 | || || | ||| || || || | ||||| ||||| | | | ||| ||||| Sbjct 237 AAAATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATC--CTGTATCTTGGCCTTGA 294 Query 18250 CCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTT 18309 | | | ||| ||||||| |||||| ||| | ||| ||| | ||||| |||| || | Sbjct 295 CATTTTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCT 354 Query 18310 TTACAAAAATTTGCAT 18325 |||| || || ||||| Sbjct 355 TTACGAAGATCTGCAT 370 >seq1187548 Length=1734 Score = 102 bits (112), Expect = 6e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 |||| ||| |||| || | || || ||||||||||| || || || | || || Sbjct 1733 AGTCGAAGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGT 1674 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | ||||||||| ||||| || ||| |||| ||||| |||||||| ||| | |||||| Sbjct 1673 CCATCTTCCAACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCT 1614 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 ||||| ||| | ||| || | | ||| ||||||| || || ||||| || Sbjct 1613 TTATCCTGAATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTT 1554 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || |||| || |||| ||| || ||||| || |||||| Sbjct 1553 ATTGTTTTACCAGTCAGTGTCTTCACAAAGATCTGCATT 1515 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 |||| ||| |||| || | || || ||||||||||| || || || | || || Sbjct 602 AGTCGAAGGACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGT 543 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | ||||||||| |||||||| ||| | || || || ||||| || || | ||||| Sbjct 542 CCATCTTCCAACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCT 483 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 ||||| |||| ||| || | | | | ||||||| || || |||| ||| Sbjct 482 TTATCCTGGATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTG 423 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334 ||| | ||||| || | |||||| ||||| |||||||| |||| || Sbjct 422 ATGGTCTTGCCAGTGAGTGTTTTAACAAAGATTTGCATGGTTAACCT 376 >seq2837514 Length=268 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 18126 AGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTG 18185 || || ||||| || || ||||||||||| | | |||| | |||||||| |||||| Sbjct 2 AGGGTGGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTTCGGCCATCTTCCAGTTGTTTC 61 Query 18186 CCCGCATAGA-TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTG 18244 || ||| | | | || | ||| ||||| || | |||||||||||| || | Sbjct 62 CCTGCAAAAAATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGATCTTAGC 121 Query 18245 CTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAA 18304 |||||| | | ||| ||||||| | ||| ||| | ||| || | ||||| |||| Sbjct 122 CTTGACATTTTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTATTGTCTTGCCAGTCAG 181 Query 18305 TGTTTTTACAAAAATTTGCAT 18325 || |||||||| |||||||| Sbjct 182 GGTCTTTACAAATATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356289792198375