Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq438317 125 8e-24 seq326921 114 2e-20 seq70167 109 6e-19 seq28755 109 6e-19 seq17242 104 3e-17 seq4470012 87.8 2e-12 seq2861173 86.0 7e-12 seq780981 86.0 7e-12 >seq438317 Length=14545 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 33968 ATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 34027 ||||||||| || || |||||||| || |||||||| || | | ||| || |||| Sbjct 3418 ATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATG 3477 Query 34028 TTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 34087 |||| | | ||| ||| ||| ||| | |||||| || | |||||||||||| Sbjct 3478 CCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTC 3537 Query 34088 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGAT 34147 | |||||||||||||| |||||||| || ||||| | ||| || ||| |||| | ||| Sbjct 3538 AGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGAT 3597 Query 34148 TGGGAAAATAACAAATC 34164 |||||||| ||||||| Sbjct 3598 GGGGAAAATTACAAATC 3614 >seq326921 Length=5948 Score = 114 bits (126), Expect = 2e-20 Identities = 235/344 (68%), Gaps = 18/344 (5%) Strand=Plus/Minus Query 33788 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 33847 |||||| | |||| |||||||| ||||||||| | | |||| | ||||| Sbjct 5168 TTTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCG 5109 Query 33848 AACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTG 33907 || ||| ||||| | | |||||| ||||| || |||||||| ||||| || || | | Sbjct 5108 AATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGCATTTTA 5049 Query 33908 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAA-AATCGTTCTGCTA 33966 ||| | || | | || || ||| || |||| ||| | ||||||||| ||| Sbjct 5048 AAACGC------AC-TGT-GCTTCAAGAATTTGTACTT-TGTGAATGAATCGTTCTACTA 4998 Query 33967 AATTTT-CATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 |||||| || |||||||||||||||| ||||||||||| | || | | ||| || ||| Sbjct 4997 AATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAA 4938 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 34085 || | ||| | || |||| | ||||| || ||| | ||| |||||| Sbjct 4937 TACTGTTCATTGACCGTAAGTTGTTCCCAATGAT-------TTTTCCCAAATCAACTTCT 4885 Query 34086 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 34129 || || |||||||| | || | || || |||||||| |||| Sbjct 4884 TCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCA 4841 >seq70167 Length=66857 Score = 109 bits (120), Expect = 6e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 62997 ATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTG 63056 || || || || |||||||| |||||||| |||||||| ||||| ||||| || | Sbjct 49987 ATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTTGCTGATTTGATTTACGG 50046 Query 63057 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 63116 ||||| ||||| ||||| || ||| | ||||| ||||||||||||||||| || ||||| Sbjct 50047 TTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAATCTGAGAGTCAATAATG 50106 Query 63117 GCTTTCCA 63124 || | ||| Sbjct 50107 GCATACCA 50114 >seq28755 Length=37593 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 80993 ATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTGTGAGCGTATGGCA 81052 || ||||| || |||| |||||| |||||||||||||| || || ||||| Sbjct 15851 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAACGTTTGCAGAAGAAATGGCC 15792 Query 81053 AACGAAGGAAAAATAGTTATAGTAGCCGCGCTCGATGGGACATTTCAACGTAGACCGTTT 81112 || ||||||||||| |||| | ||| || |||| ||||||| | | | | || Sbjct 15791 AATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAACATTTCGAAGAGAAGCTTTC 15732 Query 81113 AATAATATTTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTGT 81172 ||||| |||||||| ||||||||| | |||| ||||||||| || ||| || ||| Sbjct 15731 GGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTGT 15672 Query 81173 ATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 81205 ||| || ||| | |||||||| ||| | ||| Sbjct 15671 ATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq17242 Length=2525 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33609 TCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 33668 || ||||| || | ||| ||| || || || || ||||| || || | || |||||| Sbjct 2213 TCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAGC 2154 Query 33669 CAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATA 33728 |||||||| || || || || || || ||||| |||||||| || |||||||| ||| Sbjct 2153 CAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGCT 2094 Query 33729 AGTCTCTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 33785 | ||| || ||| | || ||| || ||||| || ||||||| | |||||| Sbjct 2093 ACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTTC 2034 Query 33786 TTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33823 || || | ||| || | ||||| |||||||| || || Sbjct 2033 TTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq4470012 Length=581 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 80765 GGCGGACATATTCAGTTGATAATCGGCCCCATGCTTTCAGGTAAAAGTACAGAATTAATT 80824 || ||||| || || | ||| |||| | |||| |||| || |||| |||||||||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 80825 AGACGAGTTAGACGTTATCAAATAGCTCAAT-ATAAATGTGTGACTATAAAATATTCTAA 80883 | ||| | | ||| |||||||| | | ||| |||| || | | ||||||||| || | Sbjct 177 CGGCGATTGAAACGGTATCAAATTG-TAAATCATAAGTGCCTAATTATAAAATACGCTCA 235 Query 80884 CGATAATAGATA 80895 |||||||||||| Sbjct 236 CGATAATAGATA 247 >seq2861173 Length=269 Score = 86.0 bits (94), Expect = 7e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 80998 TATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGCAAACG 81056 ||| ||||||| |||||| ||||||||||| | ||| | || ||| ||||| || Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGCCAATC 211 Query 81057 AAGGAAAAATAGTTATAGTAGCCGCGCTCGATGGGACATTTCAACGTAGACCGTTTAATA 81116 |||||||||| |||| | ||| || | || || |||| | | | | | || | Sbjct 210 AAGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAA 151 Query 81117 ATATTTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTGTATGA 81176 ||||||| || | ||||| ||| | |||| ||||||||| || ||| || |||||| Sbjct 150 ATATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGT 91 Query 81177 AATGCTTTAAGGAGGCTTCCTTTTCTAAA 81205 || ||| | || ||||| ||| | ||| Sbjct 90 CGTGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq780981 Length=1727 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| || ||||| || | ||| ||| || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 ||||||||||||| || || || || || || ||||| |||||||| || |||||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 33724 CA 33725 || Sbjct 28 CA 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590559691266000