Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq326921 118 1e-21 seq438317 116 5e-21 seq70167 114 2e-20 seq28755 107 2e-18 seq17242 107 2e-18 seq4470012 96.9 4e-15 seq2444859 89.7 6e-13 seq780981 89.7 6e-13 seq4386908 82.4 9e-11 seq2861173 82.4 9e-11 seq314876 82.4 9e-11 >seq326921 Length=5948 Score = 118 bits (130), Expect = 1e-21 Identities = 236/344 (69%), Gaps = 18/344 (5%) Strand=Plus/Minus Query 36364 TTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTT 36423 |||||| | |||| || |||| |||||||| | | |||| | ||||| Sbjct 5168 TTTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCG 5109 Query 36424 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 36483 || |||||||||| | | |||||| ||||| || |||||||| ||||| || || ||| Sbjct 5108 AATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGCATTTTA 5049 Query 36484 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA-AATCGTTCTGCTA 36542 ||| | || | | || || ||| ||||||| ||| | ||||||||| ||| Sbjct 5048 AAACGC------AC-TGT-GCTTCAAGAATTTGTACTT-TGTGAATGAATCGTTCTACTA 4998 Query 36543 AATTTT-CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 |||||| || |||||||||| ||||| ||||||||||| | || | | ||| || ||| Sbjct 4997 AATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAAA 4938 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 36661 || | ||| || || |||| | ||||| || ||| | ||| |||||| Sbjct 4937 TACTGTTCATTGACCGTAAGTTGTTCCCAATGAT-------TTTTCCCAAATCAACTTCT 4885 Query 36662 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 36705 || || |||||||| | || | || || |||||||| |||| Sbjct 4884 TCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCA 4841 >seq438317 Length=14545 Score = 116 bits (128), Expect = 5e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 36544 ATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 ||||||||| || || || ||||| || |||||||| || | | ||| || |||| Sbjct 3418 ATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATG 3477 Query 36604 TTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTC 36663 |||| | | | ||| ||| ||| ||| | |||||| || | |||||||||||| Sbjct 3478 CCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTC 3537 Query 36664 CACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAAT 36723 | |||||||||||||| |||||||| || ||||| | ||| || ||| |||| | || Sbjct 3538 AGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGAT 3597 Query 36724 TGGAAAAATAACAAATC 36740 || ||||| ||||||| Sbjct 3598 GGGGAAAATTACAAATC 3614 >seq70167 Length=66857 Score = 114 bits (126), Expect = 2e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 65790 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 65849 || || || || |||||||| ||||||||||||||||| ||||| ||||| || | Sbjct 49987 ATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTTGCTGATTTGATTTACGG 50046 Query 65850 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 65909 ||||| ||||| ||||| || ||| | ||||| ||||||||||||||||| || ||||| Sbjct 50047 TTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAATCTGAGAGTCAATAATG 50106 Query 65910 GCTTTCCA 65917 || | ||| Sbjct 50107 GCATACCA 50114 Score = 86.0 bits (94), Expect = 8e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||| ||||| |||||||| |||||||| || | || | ||| || || || || || | Sbjct 30007 TACCTGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAAT 30066 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 ||||||||||||||| | ||| || ||||| || || || ||||| || || | | || Sbjct 30067 AGACTCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAA 30126 Query 65300 ACTATTTCTAAGACC 65314 ||| || || | ||| Sbjct 30127 ACTGTTCCTTACACC 30141 >seq28755 Length=37593 Score = 107 bits (118), Expect = 2e-18 Identities = 276/413 (67%), Gaps = 13/413 (3%) Strand=Plus/Minus Query 83604 TTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTCAATAT 83663 || || ||||||| || ||||||||| | || | | |||||||||||| || || || Sbjct 16043 TTCTCCGGTAAAACCACCGAATTAATTCGGAGAATAAAACGTTATCAAATTGCA-AAGAT 15985 Query 83664 -AAATGCGTGACTATAAAATATTCTAACGATAATAGATACGG---AACGGGACTATGGAC 83719 |||||| | | || || |||| |||| ||||||||||| | || | | || | Sbjct 15984 GAAATGCCTTATTAGAAGATATGCTAATGATAATAGATATAGCTCAAATGCATTAG---C 15928 Query 83720 GCATGATA-AGAATAATTTTGAAGCATTGGAAGCAACTAAACTATGTGATGTCTTGGAAG 83778 ||||| | || | ||| | ||| | || || ||| || | || | || | | Sbjct 15927 ACATGACGGACAAACACTTTCA-GCAATTTCCGCTACAAAATTAATTTATTTAATGCACG 15869 Query 83779 CAATTACAGATTTCTCCGTGATAGGTATTGATGAAGGACAGTTCTTTCCAGACATTGTTG 83838 || | ||| | || ||||| || |||| |||||| |||||||||||||| Sbjct 15868 TTATGA---ATTATGATATTATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAA 15812 Query 83839 AATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCAGCACTCGATGGGA 83898 || || ||||| || ||||||||||| |||| | || || |||| | Sbjct 15811 CGTTTGCAGAAGAAATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAA 15752 Query 83899 CATTTCAACGTAAACCGTTTAATAATATCTTGGATATTATTCCATTATCTGAAATGGTGG 83958 |||||| | | || | || ||||||||| || | ||||||||| | |||| |||| Sbjct 15751 CATTTCGAAGAGAAGCTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGG 15692 Query 83959 TAAAACTAACTGCAGTGTGTATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 84011 ||||| || ||| || |||||| || ||| | |||||||| ||| | ||| Sbjct 15691 TAAAATTATATGCTGTCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq17242 Length=2525 Score = 107 bits (118), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 36185 TCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGC 36244 || ||||| || | ||| || || || || || ||||| || || | || |||||| Sbjct 2213 TCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAGC 2154 Query 36245 CAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATA 36304 |||||||| |||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 2153 CAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGCT 2094 Query 36305 AGTCTCTCTCCATAACCGGC---ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTC 36361 | ||| || ||| | || | ||| || ||||| || ||||||| | |||||| Sbjct 2093 ACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTTC 2034 Query 36362 TTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399 || || | ||| || | || || || ||||| || || Sbjct 2033 TTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq4470012 Length=581 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 83571 GGCGGACATATTCAGTTGATAATCGGCCCCATGTTTTCAGGTAAAAGTACAGAATTAATT 83630 || ||||| || || | ||| |||| | ||||||||| || |||| |||||||||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 83631 AGACGAGTTAGACGTTATCAAATAGCTCAAT-ATAAATGCGTGACTATAAAATATTCTAA 83689 | ||| | | ||| |||||||| | | ||| |||| ||| | | ||||||||| || | Sbjct 177 CGGCGATTGAAACGGTATCAAATTG-TAAATCATAAGTGCCTAATTATAAAATACGCTCA 235 Query 83690 CGATAATAGATA 83701 |||||||||||| Sbjct 236 CGATAATAGATA 247 >seq2444859 Length=247 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 64914 TAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 64973 ||||| |||||||| || ||||| |||| | || || || ||||| | ||||| ||| Sbjct 246 TAAAAGTGCATACTTGTGAGTTTTCCATAATTTGGTTCAGCAATATGTACATTCAGAGAC 187 Query 64974 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA 65033 || |||||||| || | || || | ||| || |||||||| | | | ||||||||| Sbjct 186 TGGCTTTGATCAATATAAGCACCACGGTCAGCGGCCATTTTCAAAACATTTTTTTGTGGA 127 Query 65034 ATTTCCCAAATAGT 65047 |||||||| | ||| Sbjct 126 ATTTCCCATACAGT 113 >seq780981 Length=1727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| || ||||| || | ||| || || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 ||||||||||||| || ||||| || ||||| |||||||||||||| || || ||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 36300 CA 36301 || Sbjct 28 CA 27 >seq4386908 Length=540 Score = 82.4 bits (90), Expect = 9e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 83599 CCATGTTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTC 83658 |||||||||| || || | |||||||||||| | ||| | | ||| |||||||| || Sbjct 291 CCATGTTTTCTGGAAATACGACAGAATTAATTCGGCGATTGAAACGGTATCAAATTGCAA 350 Query 83659 AATATAAATGCGTGACTATAAAATATTCTAACGATAATAGATA 83701 | |||||| | | | ||||||||| || ||||||||||||| Sbjct 351 ATCATAAATACCTAATTATAAAATACGCTCACGATAATAGATA 393 >seq2861173 Length=269 Score = 82.4 bits (90), Expect = 9e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 83804 TATTGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGCAAACG 83862 ||| ||||||| |||||| ||||||||||| | ||| | || ||| ||||| || Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGCCAATC 211 Query 83863 AAGGAAAAATAGTTATAGTAGCAGCACTCGATGGGACATTTCAACGTAAACCGTTTAATA 83922 |||||||||| |||| | || || | || || |||| | | ||| | || | Sbjct 210 AAGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAA 151 Query 83923 ATATCTTGGATATTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTGTATGA 83982 |||| || || | ||||| ||| | |||| ||||||||| || ||| || |||||| Sbjct 150 ATATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGT 91 Query 83983 AATGCTTTAAGGAGGCTTCCTTTTCTAAA 84011 || ||| | || ||||| ||| | ||| Sbjct 90 CGTGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq314876 Length=46846 Score = 82.4 bits (90), Expect = 9e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 83799 ATAGGTATTGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGC 83857 || ||||| || |||| |||||| ||||||||||| | ||| | || ||| ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGC 32888 Query 83858 AAACGAAGGAAAAATAGTTATAGTAGCAGCACTCGATGGGACATTTCAACGTAAACCGTT 83917 || ||||||||||| |||| | || | || || || |||| | | || | || Sbjct 32889 CAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGAAGCTTT 32948 Query 83918 TAATAATATCTTGGATATTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGTGTG 83977 ||||||||| || | ||||| ||| | |||| ||||||||| || ||| || | Sbjct 32949 CGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTA 33008 Query 83978 TATGAAATGCTTTAAGGAGGCTTCCTTTTCTAAA 84011 |||| | ||| | || ||||| ||| | ||| Sbjct 33009 TATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617147449623000