Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1187548 107 2e-18 seq215054 104 2e-17 seq2361161 100 3e-16 seq2837514 96.9 3e-15 seq329421 93.3 4e-14 seq3343411 87.8 2e-12 seq1136994 86.0 6e-12 seq4730498 84.2 2e-11 seq990654 84.2 2e-11 seq4202 84.2 2e-11 seq197271 82.4 7e-11 >seq1187548 Length=1734 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 || |||||||||||||| |||||||| || |||| || | ||||| | |||||| || Sbjct 581 GTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA-TCTTCCAACTGTTTGCC 523 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 |||| | ||||| | || || || || || || |||||||| || |||||| || Sbjct 522 AGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGGATTTTAGCCTT 463 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | ||| | |||||| | || |||||||||| || | |||||||| || | || Sbjct 462 CACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTGCCAGTGAGTGT 403 Query 139747 TTTTACGAATATTTGCAT 139764 ||| || || |||||||| Sbjct 402 TTTAACAAAGATTTGCAT 385 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 || |||||||||||||| |||||||| || |||| || | ||||| | |||||| || Sbjct 1712 GTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA-TCTTCCAACTGTTTTCC 1654 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TT 139685 |||| ||||||| | || ||||| || || ||||||||||| || ||| | || | | Sbjct 1653 AGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATC-CTGAATCTTAGCCT 1595 Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | ||| | |||||| | || ||||| |||| || | || || || |||| | Sbjct 1594 TCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTACCAGTCAGTG 1535 Query 139746 TTTTTACGAATATTTGCAT 139764 | || || || || ||||| Sbjct 1534 TCTTCACAAAGATCTGCAT 1516 >seq215054 Length=1089 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 139541 CCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATT 139600 || ||||| | ||| || | |||| || || || ||||| |||||||| || | Sbjct 615 CCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGG 674 Query 139601 GTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTAT 139659 || | || | || || |||||||| || ||| | || || | || ||||| || || || Sbjct 675 GTACGTCCA-TCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAAT 733 Query 139660 GCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTC 139719 ||||||||| || |||||| ||||| | ||| | |||||| | || ||||| || Sbjct 734 GCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTC 793 Query 139720 AACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || ||| | |||||||| ||||| || || || || || |||||| Sbjct 794 AAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATA 839 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| | ||| || || ||| | |||||||||||||| || || ||||| |||||||| Sbjct 216 TCTTCCAACTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTA 275 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || || || || | | ||| | ||||| |||||||||| || | ||| | Sbjct 276 TCCTGTATCTTGGCCTTGACATTTTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATG 335 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 |||||||| |||| || |||||||| || |||||| || Sbjct 336 GTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCATACCT 374 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| |||| || | ||||| || |||||||||||||| || | Sbjct 840 CCACCACGCAGACGCAGTACTAGATGCAGAGTAGATTCCTTTTGAATGTTATAGTCTGAC 899 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||||| ||||| || || ||| | |||||||||||||| || ||||| Sbjct 900 AGTGTGCGACCATCTTCAAGCTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCAGGAGGA 959 Query 139658 ATGCCTTCTTTGTC 139671 || ||||| || || Sbjct 960 ATACCTTCCTTATC 973 >seq2361161 Length=242 Score = 100 bits (110), Expect = 3e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTT 139613 ||| || || | |||||||| || || ||| | ||||| || |||| || | |||| Sbjct 201 AACCAAATGTAGAGTAGACTCCTTCTGGATGCTGTAATCAGACAAGGTGCGTCCA-TCTT 143 Query 139614 CGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 139673 | |||||||| |||||| | ||||| | ||||| || || || ||||||||||| || Sbjct 142 CCAGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCCT 83 Query 139674 TGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 |||||| ||| | | ||| | ||||| | || |||||||||| || | |||| Sbjct 82 GGATTTTGGCTTTCACATTTTCTATCGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCT 23 Query 139734 TGCCGGTCAACGTTTTTACGAA 139755 |||| || | ||||| ||||| Sbjct 22 TGCCAGTTAGTGTTTTGACGAA 1 >seq2837514 Length=268 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGA-TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| || ||||| || ||| | | |||||||||||||||| ||||| |||||||| || Sbjct 47 TCTTCCAGTTGTTTCCCTGCAAAAAATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTT 106 Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| || || | | ||| | ||||| | | |||||| || | ||| | Sbjct 107 ATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTAT 166 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 |||||||| |||| || ||||| |||||||||||| || Sbjct 167 TGTCTTGCCAGTCAGGGTCTTTACAAATATTTGCATACCT 206 >seq329421 Length=21321 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| ||||| || | ||||| || ||||||||||||||||| | Sbjct 18611 CCACCACGCAGACGCAGTACTAAATGCAGAGTAGATTCCTTTTGAATGTTATAATCTGAC 18670 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || |||||| | |||||||| |||||||| ||||| Sbjct 18671 AGAGTGCGACCATCTTCAAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGATCAGGAGGA 18730 Query 139658 ATGCCTTCTTTGTC 139671 || ||||| || || Sbjct 18731 ATACCTTCCTTATC 18744 >seq3343411 Length=310 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || ||||| | ||| || | |||| || || || ||||| |||||||| || Sbjct 91 GCCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGA 150 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | |||| || | || || |||||||| || ||| | || || | |||||||| || | Sbjct 151 GAGGGTGCGTCCA-TCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGG 209 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||||||||| || |||||| ||||| | ||| | ||||| | || |||| Sbjct 210 GAATGCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCA 269 Query 139716 CCTCAACGGTCACCGTCTTGCCGGT 139740 | |||| ||| | ||||| || || Sbjct 270 CTTCAAGGGTAATGGTCTTACCAGT 294 >seq1136994 Length=1672 Score = 86.0 bits (94), Expect = 6e-12 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGA 139608 |||| ||||||||||| || || ||||||||||| ||||| || || || | || | Sbjct 706 CGCAGAACTAAGTGAAGGGTTGATTCTTTTTGAATATTATAGTCCGACAGAGTACGTCCA 765 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 139664 ||||| ||||| || |||||| | || ||||| |||||||| ||||| || |||| Sbjct 766 -TCTTCAAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCAGGAGGAATACCTT 820 >seq4730498 Length=794 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || |||||||| || || | ||||| ||||||| || || ||| Sbjct 479 GTTGACTCCTTCTGAATGTTGTAGTCAGAAAGTGTGCGACCATCTTCGAATTGCTTTCCA 538 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 | | | |||| || |||||||| ||| | |||||||||||||| ||| |||||| ||| Sbjct 539 GAAAAAATCAAGCGCTGCTGATCAGGAAGAATGCCTTCTTTGTC-CTGAATTTTTGCTTT 597 Query 139688 AGCTGTTCCA-CTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | ||||| ||| || | || || ||||| | ||| | || || || || | || Sbjct 598 CACGTTTCCATTTGTATCAGAAGGTTCAACCTCTAGGGTGATGGTTTTCCCTGTGAGGGT 657 Query 139747 TTTTACGAATATTTGCAT 139764 ||| || || || ||||| Sbjct 658 TTTCACAAAAATCTGCAT 675 >seq990654 Length=1195 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/155 (73%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| ||||| || || || | ||| || ||||| ||||| || ||| Sbjct 1156 GTTGACTCTTTCTGAATATTGTAGTCTGAGAGTGTTCTGCCATCTTCCAGCTGCTTTCCA 1097 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| | || |||||||||||||| || || ||||||||||| || ||| |||||| || Sbjct 1096 GCAAAAATAAGACGTTGCTGATCAGGTGGAATGCCTTCTTTATC-TTGAATTTTTGCCTT 1038 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAA 139721 | | || | ||||| |||| ||||| |||| Sbjct 1037 CACATTCTCAATAGTGTCACTGGGTTCCACTTCAA 1003 >seq4202 Length=39063 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| | ||||| | ||||| || || || ||||||||||| Sbjct 37563 TCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTA 37622 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||||| ||| | | ||| | ||||| | || |||||||||| || | Sbjct 37623 TCCTGTATTTTGGCTTTCACATTTTCTATCGTGTCACTTGGTTCCACCTCAAGTGTGATG 37682 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAA 139755 |||||||| || | ||||| ||||| Sbjct 37683 GTCTTGCCAGTTAGTGTTTTGACGAA 37708 >seq197271 Length=6114 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/122 (75%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||| ||||| ||||| || ||||| | ||| || ||||| | |||| Sbjct 1563 TGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAGAGTGTTCTGCCATCTTCCAACTGT 1504 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || ||| | || |||||||||||||| || || ||||||||||| || ||| |||| Sbjct 1503 TTTCCTGCAAAAATGAGACGTTGCTGATCAGGTGGAATGCCTTCTTTATC-TTGAATTTT 1445 Query 139682 TG 139683 || Sbjct 1444 TG 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465143245740000