Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq28755 125 9e-24 seq438317 122 1e-22 seq326921 122 1e-22 seq70167 120 4e-22 seq17242 114 2e-20 seq4470012 96.9 4e-15 seq780981 89.7 6e-13 seq2861173 86.0 8e-12 seq4386908 82.4 1e-10 seq314876 82.4 1e-10 >seq28755 Length=37593 Score = 125 bits (138), Expect = 9e-24 Identities = 280/413 (68%), Gaps = 13/413 (3%) Strand=Plus/Minus Query 89556 TTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTCAATAT 89615 || || ||||||| || ||||||||| | || | | |||||||||||| || || || Sbjct 16043 TTCTCCGGTAAAACCACCGAATTAATTCGGAGAATAAAACGTTATCAAATTGCA-AAGAT 15985 Query 89616 -AAATGCGTGACTATAAAATATTCTAACGATAATAGATACGG---AACGGGACTATGGAC 89671 |||||| | | || || |||| |||| ||||||||||| | || | | || | Sbjct 15984 GAAATGCCTTATTAGAAGATATGCTAATGATAATAGATATAGCTCAAATGCATTAG---C 15928 Query 89672 ACATGATA-AGAATAATTTTGAAGCATTGGAAGCAACTAAACTATGCGATGTCATGGACG 89730 |||||| | || | ||| | ||| | || || ||| || || | ||| ||| Sbjct 15927 ACATGACGGACAAACACTTTCA-GCAATTTCCGCTACAAAATTAATTTATTTAATGCACG 15869 Query 89731 CAGTTACAGATTTCTCTGTGATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTG 89790 ||| ||| | | || ||||| || |||| |||||| |||||||||||||| Sbjct 15868 ---TTATGAATTATGATATTATCGGTATAGACGAAGCACAGTTTTTTCCAGACATTGTAA 15812 Query 89791 AATTCTGTGAGCGTATGGCAAACGAAGGAAAGATAGTTATAGTAGCCGCACTCGATGGGA 89850 || || ||||| || ||||||| ||| |||| | ||| || |||| | Sbjct 15811 CGTTTGCAGAAGAAATGGCCAATCAAGGAAAAATAATTATCATTGCCTGTCTAAATGGAA 15752 Query 89851 CATTTCAACGTAAACCGTTTAATAATATATTGGATCTTATTCCATTATCTGAAATGGTGG 89910 |||||| | | || | || ||||| ||| |||| ||||||||| | |||| |||| Sbjct 15751 CATTTCGAAGAGAAGCTTTCGGAAATATCTTGAATCTAATTCCATTAGCCGAAAGCGTGG 15692 Query 89911 TAAAACTAACTGCTGTGTGTATGAAATGCTTTAAGGAGGCTTCCTTTTCCAAA 89963 ||||| || |||||| |||||| || ||| | |||||||| ||| | ||| Sbjct 15691 TAAAATTATATGCTGTCTGTATGTCGTGTTTTCAAGAGGCTTCGTTTACAAAA 15639 >seq438317 Length=14545 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 42451 ATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 42510 |||||| || || || || ||||| || |||||||| || | | ||| || |||| Sbjct 3418 ATTTTCATTAACAATACCATCACTAGCAGCAAAAAAGGCTAGGATATGCGAAATGAAATG 3477 Query 42511 TTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTC 42570 |||| | | ||||||| ||| ||| | |||||| || | ||| |||||||| Sbjct 3478 CCTTTCTGTAGATTTTAATTTCCCCCAGTCAGCTAAATCTTTTGAGAGATCCACTTCTTC 3537 Query 42571 TACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAAT 42630 | ||||||||||||||||||||||| || ||||| | ||| |||||| |||| | || Sbjct 3538 AGCAGTCCAAAATGATGCTTCTGCCTTCTTGTACATTTGCCAAATATCAGGATACTCGAT 3597 Query 42631 TGGGAAAATAACAAATC 42647 |||||||| ||||||| Sbjct 3598 GGGGAAAATTACAAATC 3614 Score = 82.4 bits (90), Expect = 1e-10 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 ||| || || ||||| || || | ||||| |||||||| || || | |||||||| || Sbjct 884 ATCCTTTACGTATGTGTCAATTAGCAGACTGTACATTTCAGAGTGGACATTTTCAATTGC 943 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 ||||||||||| ||||| || | ||| || || ||||| ||||| Sbjct 944 AATCTGAAATCCATAGAAGCAGCGGGCTTCTGTGACCTGAACTTC 988 >seq326921 Length=5948 Score = 122 bits (134), Expect = 1e-22 Identities = 244/354 (69%), Gaps = 26/354 (7%) Strand=Plus/Minus Query 42271 TTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTT 42330 |||||| | |||| |||||||| ||||||||| | | |||| | ||||| Sbjct 5168 TTTTACGTACGGCAACGTTTCTACGGCATTAAATGAAAACAATTTTACGACTTTATCTCG 5109 Query 42331 AACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTG 42390 || ||||||||| | | |||||| ||||| ||||||||||| ||||| || || | | Sbjct 5108 AATATATGTATCATTAAGAAGACTGTACATCTCTGAATGAATATTTTCTATAGCATTTTA 5049 Query 42391 AAATCCGTAGAAACATCTG-GCCTCGGTAACCTGTACTTCTGTACAA-AATCGTTCAGCT 42448 ||| || | ||| || || || ||||||| ||| | |||||||| || Sbjct 5048 AAA--CGCA-------CTGTGCTTCAAGAATTTGTACTT-TGTGAATGAATCGTTCTACT 4999 Query 42449 AAATTTT-CGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 42507 ||||||| | |||||||||| ||||| ||||||||||| | || | | ||| || || Sbjct 4998 AAATTTTTCACTCACTATTCCATCACTAGCTGCAAAAAATGTTAAAATGTATTTAATGAA 4939 Query 42508 ATATTTTTC---GTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTAC 42564 ||| | ||| | ||| ||| || |||| || |||| ||| | ||| || Sbjct 4938 ATACTGTTCATTGACCG----TAAGTTGTTCC---CAATGAT---TTTTCCCAAATCAAC 4889 Query 42565 TTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATC 42618 ||||||||| |||||||| | || | || || |||||||| |||| | ||| Sbjct 4888 TTCTTCTACAGTCCAAAAGAAAGCAACAGCTTTCTTATACATGGTCCATAAATC 4835 >seq70167 Length=66857 Score = 120 bits (132), Expect = 4e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 71724 TACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGT 71783 |||||||| ||| | |||| | |||||| || || |||||||| ||||||||||| Sbjct 49959 TACCTCATCTGCAGAGCTGTATTCAACAATTTCTGTACATAGATTACTGCACTTGATGGT 50018 Query 71784 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGT 71843 |||||| ||||| ||||| || |||||| ||||| ||||| || || | ||||| Sbjct 50019 TCCTAAGTTTTGCTGATTTGATTTACGGTTACATGCATCTTTATAGAGCATGTAAGGAGT 50078 Query 71844 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879 ||||||||||||||||| || ||||| || | ||| Sbjct 50079 GCCAGTTTCAATCTGAGAGTCAATAATGGCATACCA 50114 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||| ||||| |||||||| |||||||| || | || | ||| || || || || || | Sbjct 30007 TACCTGAAACTCTCCAGATAATACTCTTCGGATATAGAAATTGCTAGTGTATGGCTCAAT 30066 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 |||||||||||||| | ||| || ||||| || || || ||||| || || | | | Sbjct 30067 AGACTCATTATTTCCAAGAATCTGTGCAGTCGAAGCTGTTGGCATTGGAGCTATTAGCAA 30126 Query 71262 ACTATTTCTAAGACCATGT 71280 ||| || || | ||||||| Sbjct 30127 ACTGTTCCTTACACCATGT 30145 Score = 82.4 bits (90), Expect = 1e-10 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 71581 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTG 71640 || |||| ||||||||||| | |||||| ||||| |||||||| ||| || ||||| Sbjct 40619 TCAGGAACTGGATAATAATTGACATCTATTATTTTGTTGAGATTCCTGGTAATGACTTTA 40678 Query 71641 ACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATTACAAACACGTTCAAGGCA 71700 || || |||| ||| ||| |||||| || || | ||| | ||| | |||| Sbjct 40679 GTGACCTCTTTTAACTTGTCAAAGTCAAATTTCTGGTCCTTGACATAGCGGTTAAGGGCA 40738 Query 71701 ACAGATGCCAGATTACAAACGGCTACCT 71728 | || |||||||| ||||| ||||||| Sbjct 40739 ATGGAAGCCAGATTGCAAACTGCTACCT 40766 >seq17242 Length=2525 Score = 114 bits (126), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 42091 ATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAG 42150 ||| ||||| || | ||| || || || || || ||||| || || | || ||||| Sbjct 2214 ATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCTTAAG 2155 Query 42151 CCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAAT 42210 ||||||||| |||||||| || ||||| ||||| |||||||| || || ||||| ||| Sbjct 2154 CCAAAATATTGACGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAGCAGC 2095 Query 42211 AAGTCTCTCTCCATAACCGGC---ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTT 42267 | ||| || ||| | || | ||| || ||||| || ||||||| | ||||| Sbjct 2094 TACTCTTTCACCAAATGATGCATTAGTGTGATTAATCCAGTTCAAAGCCCAAACAGCCTT 2035 Query 42268 CTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 ||| || | ||| || | ||||| |||||||| || || Sbjct 2034 CTTCTTAATACATGGGAGAGTTTCAATGGCATTGAACAG 1996 >seq4470012 Length=581 Score = 96.9 bits (106), Expect = 4e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 89523 GGTGGACATATTCAGTTGATAATCGGCCCCATGTTTTCAGGTAAAAGTACAGAATTAATT 89582 || ||||| || || | ||| |||| | ||||||||| || |||| |||||||||||| Sbjct 117 GGAGGACAAATCCAAATTATATTCGGACTCATGTTTTCTGGAAAAACGACAGAATTAATT 176 Query 89583 AGACGAGTTAGACGTTATCAAATAGCTCAAT-ATAAATGCGTGACTATAAAATATTCTAA 89641 | ||| | | ||| |||||||| | | ||| |||| ||| | | ||||||||| || | Sbjct 177 CGGCGATTGAAACGGTATCAAATTG-TAAATCATAAGTGCCTAATTATAAAATACGCTCA 235 Query 89642 CGATAATAGATA 89653 |||||||||||| Sbjct 236 CGATAATAGATA 247 >seq780981 Length=1727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||| ||||| || | ||| || || || || || ||||| || || | || | Sbjct 148 CCTCATCCCTACTGATAAGTTCATTACTGAAGGTAAGACCTGGCATAAGTCCTCTTTTCT 89 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 ||||||||||||| || ||||| || ||||| ||||| |||||||| || || ||||| | Sbjct 88 TAAGCCAAAATATTGATGCAAAGGAACCAGAGAAGAAAATTCCTTCAACAGCAGCAAAAG 29 Query 42207 CA 42208 || Sbjct 28 CA 27 >seq2861173 Length=269 Score = 86.0 bits (94), Expect = 8e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 89756 TATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGCAAACG 89814 ||| ||||||| |||||| ||||||||||| | ||| | || ||| ||||| || Sbjct 269 TATAGATGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGCCAATC 211 Query 89815 AAGGAAAGATAGTTATAGTAGCCGCACTCGATGGGACATTTCAACGTAAACCGTTTAATA 89874 ||||||| || |||| | ||| || | || || |||| | | ||| | || | Sbjct 210 AAGGAAAAATTATTATTATTGCCTGTCTAAACGGAACTTTTCGAAGAAAAGCTTTCGGAA 151 Query 89875 ATATATTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCTGTGTGTATGA 89934 |||| || || | ||||| ||| | |||| ||||||||| || |||||| |||||| Sbjct 150 ATATTTTACATTTAATTCCGTTAGCCGAAAACGTGGTAAAATTACATGCTGTTTGTATGT 91 Query 89935 AATGCTTTAAGGAGGCTTCCTTTTCCAAA 89963 || ||| | || ||||| ||| | ||| Sbjct 90 CGTGTTTTCAAGAAGCTTCATTTACAAAA 62 >seq4386908 Length=540 Score = 82.4 bits (90), Expect = 1e-10 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 89551 CCATGTTTTCAGGTAAAAGTACAGAATTAATTAGACGAGTTAGACGTTATCAAATAGCTC 89610 |||||||||| || || | |||||||||||| | ||| | | ||| |||||||| || Sbjct 291 CCATGTTTTCTGGAAATACGACAGAATTAATTCGGCGATTGAAACGGTATCAAATTGCAA 350 Query 89611 AATATAAATGCGTGACTATAAAATATTCTAACGATAATAGATA 89653 | |||||| | | | ||||||||| || ||||||||||||| Sbjct 351 ATCATAAATACCTAATTATAAAATACGCTCACGATAATAGATA 393 >seq314876 Length=46846 Score = 82.4 bits (90), Expect = 1e-10 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 89751 ATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTG-TGAGCGTATGGC 89809 || ||||| || |||| |||||| ||||||||||| | ||| | || ||| ||||| Sbjct 32830 ATCGGTATAGACGAAGCACAGTTTTTTCCAGACATCG-TGACGTTTGCTGAAGAAATGGC 32888 Query 89810 AAACGAAGGAAAGATAGTTATAGTAGCCGCACTCGATGGGACATTTCAACGTAAACCGTT 89869 || ||||||| ||| |||| | ||| | || || || |||| | | || | || Sbjct 32889 CAATCAAGGAAAAATAATTATCATTGCCTGTTTAGACGGAACTTTTCGAAGAGAAGCTTT 32948 Query 89870 TAATAATATATTGGATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCTGTGTG 89929 ||||| ||| || | ||||| ||| | |||| ||||||||| || |||||| | Sbjct 32949 CGGAAATATCTTGCATTTAATTCCGTTAGCCGAAAGCGTGGTAAAATTATATGCTGTCTA 33008 Query 89930 TATGAAATGCTTTAAGGAGGCTTCCTTTTCCAAA 89963 |||| | ||| | || ||||| ||| | ||| Sbjct 33009 TATGTCGCGTTTTCAAGAAGCTTCATTTACAAAA 33042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629305625547000