Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2361161 104 2e-17 seq215054 98.7 9e-16 seq197271 95.1 1e-14 seq3343411 93.3 4e-14 seq1187548 93.3 4e-14 seq21712 93.3 4e-14 seq2837514 91.5 1e-13 seq4202 84.2 2e-11 seq990654 82.4 7e-11 >seq2361161 Length=242 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| || | || | ||| ||||| | ||||| || || || ||| ||||||| | Sbjct 218 CCTCCGCGAAGTCGAAGAACCAAATGTAGAGTAGACTCCTTCTGGATGCTGTAATCAGAC 159 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | ||||| || ||||| |||||| | ||||| | ||||| || || || Sbjct 158 AAGGTGCGTCCA-TCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTGG 100 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||||||||| || ||||| ||| | | ||| | |||||| | ||||| || Sbjct 99 AATGCCTTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATCGTGTCACTTGGTTCCAC 40 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175 |||| || | |||||||| || | |||||| ||||| Sbjct 39 CTCAAGTGTGATGGTCTTGCCAGTTAGTGTTTTGACGAA 1 >seq215054 Length=1089 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 142961 CCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATT 143020 || ||||| | ||| || | ||||| ||| ||||| ||||| ||||| || || | Sbjct 615 CCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGG 674 Query 143021 GTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTAT 143079 || | || | || || || ||||| || ||| | || || | || ||||| || || || Sbjct 675 GTACGTCCA-TCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAAT 733 Query 143080 GCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTC 143139 ||||||||| || ||||| ||||| | ||| | ||||| | ||||| ||||| Sbjct 734 GCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTC 793 Query 143140 AACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | |||||||| ||||| || || || || || |||||| Sbjct 794 AAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATA 839 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142991 GATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCA 143050 ||||| || || |||||||| || | ||| | ||||| | || || || ||| Sbjct 177 GATTCCTTCTGAATGTTGTAGTCCGAAAGTGTACGGCCATCTTCCAACTGCTTTCCTGCA 236 Query 143051 TAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC 143110 | |||||||||||||| || || ||||| |||||||| || || || || | Sbjct 237 AAAATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTATCCTGTATCTTGGCCTTGACA 296 Query 143111 TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTT 143170 | ||| | ||||| |||| || ||||| | || | |||||||| |||| || ||| Sbjct 297 TTTTCAATGGTGTCACTGGGCTCCACTTCCAGGGTTATGGTCTTGCCAGTCAGGGTCTTT 356 Query 143171 ACGAATATTTGCATAGCT 143188 ||||| || |||||| || Sbjct 357 ACGAAGATCTGCATACCT 374 >seq197271 Length=6114 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 142981 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 143040 ||||| ||||||||||| || || |||||||| | ||| || ||||| | || Sbjct 1564 ATGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAGAGTGTTCTGCCATCTTCCAACTG 1505 Query 143041 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 143100 ||| || ||| | || |||||||||||||| || || ||||||||||| || |||||| Sbjct 1504 TTTTCCTGCAAAAATGAGACGTTGCTGATCAGGTGGAATGCCTTCTTTATCTTGAATTTT 1445 Query 143101 TTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGT 143145 | || | | ||| | ||||| ||||||| ||||| | ||| Sbjct 1444 TGCCTTCACGTTTTCTATAGTGTCACTGGGTTCAACTTCCAAAGT 1400 >seq3343411 Length=310 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || ||||| | ||| || | ||||| ||| ||||| ||||| ||||| || || Sbjct 91 GCCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGA 150 Query 143017 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | |||| || | || || || ||||| || ||| | || || | |||||||| || | Sbjct 151 GAGGGTGCGTCCA-TCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGG 209 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | ||||||||||| || ||||| ||||| | ||| | |||||| | ||||| | Sbjct 210 GAATGCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCA 269 Query 143136 CTTCAACAGTCACCGTCTTGCCGGT 143160 |||||| || | ||||| || || Sbjct 270 CTTCAAGGGTAATGGTCTTACCAGT 294 >seq1187548 Length=1734 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTC 143034 || ||||| | || || |||||||| || || ||||| || |||| || | ||||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCA-TCTTC 1666 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 | ||||| |||||| ||||||| | || ||||| || || ||||||||||| || Sbjct 1665 CAACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTG 1606 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||| || || | | ||| | ||||| | ||||| ||||||| ||| | || || Sbjct 1605 AATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTT 1546 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || |||| ||| || || || || ||||| Sbjct 1545 ACCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 >seq21712 Length=99785 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||||| | || | || | ||||| |||| |||||| || || |||||||| Sbjct 91298 GCCTCCTCTCAGTCGGAGGACAAGATGAAGAGTAGTTTCTTTCTGAATATTGTAATCAGA 91239 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || || | ||| | || || |||||| | | |||||||||||||| || || Sbjct 91238 GAGTGATCTGCCATTTTCCAACTGCTTTCCAGCAAAACTGAGACGTTGCTGATCAGGTGG 91179 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||||||||| || ||||||| || | | ||| | ||||| ||||||| || Sbjct 91178 AATGCCTTCTTTTTCTTGAATTTTTGTCTTCACGTTTTCAATAGTGTCACTGGGTTCAAC 91119 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | ||| | || || || || ||||| ||||| || |||||| Sbjct 91118 TTCCAAAGTAATGGTTTTACCTGTAGGGGTTTTGACGAAGATCTGCATA 91070 >seq2837514 Length=268 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||| || | ||| | ||||| |||||||| || Sbjct 5 GTGGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTTCGGCCATCTTCCAGTTGTTTCCCT 64 Query 143048 GCATAGA-TCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106 ||| | | |||||||||||||||| ||||| |||||||| || || || || || Sbjct 65 GCAAAAAATCAGACGTTGCTGATCAGGAGGGATGCCTTCCTTATCTTGGATCTTAGCCTT 124 Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | ||| | ||||| | | || ||||| | || | |||||||| |||| || Sbjct 125 GACATTTTCAATGGTGTCACTAGTCTCCACTTCCAGGGTTATTGTCTTGCCAGTCAGGGT 184 Query 143167 TTTTACGAATATTTGCATAGCT 143188 ||||| |||||||||||| || Sbjct 185 CTTTACAAATATTTGCATACCT 206 >seq4202 Length=39063 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || ||||| |||||| | ||||| | ||||| || || || ||||||||||| Sbjct 37563 TCTTCCAGCTGTTTGCCAGCAAATATCAGCCTCTGCTGGTCTGGTGGAATGCCTTCTTTA 37622 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||| ||| | | ||| | |||||| | ||||| || |||| || | Sbjct 37623 TCCTGTATTTTGGCTTTCACATTTTCTATCGTGTCACTTGGTTCCACCTCAAGTGTGATG 37682 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAA 143175 |||||||| || | |||||| ||||| Sbjct 37683 GTCTTGCCAGTTAGTGTTTTGACGAA 37708 >seq990654 Length=1195 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || ||||| || || ||||| || | ||| || ||||| || || || ||| Sbjct 1156 GTTGACTCTTTCTGAATATTGTAGTCTGAGAGTGTTCTGCCATCTTCCAGCTGCTTTCCA 1097 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| | || |||||||||||||| || || ||||||||||| || ||||||| || Sbjct 1096 GCAAAAATAAGACGTTGCTGATCAGGTGGAATGCCTTCTTTATCTTGAATTTTTGCCTTC 1037 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGT 143145 | | || | ||||| ||||||| ||||||| ||| Sbjct 1036 ACATTCTCAATAGTGTCACTGGGTTCCACTTCAAGAGT 999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475411083354000