Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq197271 109 4e-19 seq4952844 107 1e-18 seq21712 104 2e-17 seq1187548 102 6e-17 seq2976538 89.7 3e-13 seq990654 87.8 1e-12 seq215054 84.2 1e-11 seq2535487 82.4 5e-11 >seq197271 Length=6114 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||||| ||| | || | |||||| || || ||||| || || |||||||| Sbjct 1589 TGCCTCCTCTCAGTCTGAGGACAAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCAG 1530 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | ||||| || ||||| || || | || | |||||| || || || Sbjct 1529 AGAGTGTTCTGCCATCTTCCAACTGTTTTCCTGCAAAAATGAGACGTTGCTGATCAGGTG 1470 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| |||||||| || |||||| ||| || ||||||| || || || ||| | Sbjct 1469 GAATGCCTTCTTTATCTTGAATTTTTGCCTTCACGTTTTCTATAGTGTCACTGGGTTCAA 1410 Query 15315 CATCTAAGGTAATGGTTTTACCT 15337 | || || ||||||||||||||| Sbjct 1409 CTTCCAAAGTAATGGTTTTACCT 1387 >seq4952844 Length=1519 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||||| || | || | |||||| ||||| ||||| || || || ||||| Sbjct 224 TGCCTCCTCTCAGCCTGAGGACAAGATGAAGTGTGGATTCTTTCTGAATATTATAATCTG 165 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | ||||| || || || ||||| | || | ||| ||||| || || Sbjct 164 AGAGTGTTCTGCCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGCTGTTGATCAGGTG 105 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| |||||||| || |||||| ||| ||| | || ||||| || || ||| | Sbjct 104 GAATGCCTTCTTTATCTTGAATTTTTGCCTTCACATTCTCGATGGTGTCACTGGGTTCAA 45 Query 15315 CATCTAAGGTAATGGTTTTACCTG 15338 | || || |||||||||||||||| Sbjct 44 CTTCCAAAGTAATGGTTTTACCTG 21 >seq21712 Length=99785 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||||| || | || | |||||| || | ||||| || || |||||||| Sbjct 91299 TGCCTCCTCTCAGTCGGAGGACAAGATGAAGAGTAGTTTCTTTCTGAATATTGTAATCAG 91240 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || ||| | | ||| || || || ||||| | | | |||||| || || || Sbjct 91239 AGAGTGATCTGCCATTTTCCAACTGCTTTCCAGCAAAACTGAGACGTTGCTGATCAGGTG 91180 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| |||||||| || |||||| |||| || |||| || || || || ||| | Sbjct 91179 GAATGCCTTCTTTTTCTTGAATTTTTGTCTTCACGTTTTCAATAGTGTCACTGGGTTCAA 91120 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || || ||||||||||||||||| | ||||| || || || |||||| Sbjct 91119 CTTCCAAAGTAATGGTTTTACCTGTAGGGGTTTTGACGAAGATCTGCATA 91070 >seq1187548 Length=1734 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| | ||||| |||||||| || || ||||| | | | | ||||| Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || ||||||||||| | |||| | |||||||| ||||||||||||||| || Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| ||| ||||||| || || || ||| || || | || ||||| || Sbjct 473 ATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTG 414 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| ||||| |||||||| Sbjct 413 CCAGTGAGTGTTTTAACAAAGATTTGCAT 385 >seq2976538 Length=278 Score = 89.7 bits (98), Expect = 3e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | |||| || | ||||||||| || || || || |||||||| || Sbjct 254 CCTCCTCTAAGCCTTAGTACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGAC 195 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | || | ||||| | || || ||||| | || || | || ||||| ||| Sbjct 194 AAAGTCCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATTAAGCACTGCTGGTCTGGAGGA 135 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||||||| || ||| ||||||||||||| || |||||| Sbjct 134 ATGCCTTCCTTGTCTTGAATTTTGGCTTTCACATTTTCTATGGTATCACTGGGTTCTACT 75 Query 15317 TCTAAGGTAATGGTTTTACCTG 15338 || | || |||||||| |||| Sbjct 74 TCCAGAGTTATGGTTTTGCCTG 53 >seq990654 Length=1195 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||||| ||| | || | ||| || || || ||||| || || ||||| || Sbjct 1188 TGCCTCCTCTCAGTCTGAGGACAAGATGGAGAGTTGACTCTTTCTGAATATTGTAGTCTG 1129 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | ||||| | || || ||||| | || | |||||| || || || Sbjct 1128 AGAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCAAAAATAAGACGTTGCTGATCAGGTG 1069 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| |||||||| || |||||| ||| ||| | || || || || || ||| | Sbjct 1068 GAATGCCTTCTTTATCTTGAATTTTTGCCTTCACATTCTCAATAGTGTCACTGGGTTCCA 1009 Query 15315 CATCTAAGGTAATGGTTTTACCT 15337 | || | ||||||||||||||| Sbjct 1008 CTTCAAGAGTAATGGTTTTACCT 986 >seq215054 Length=1089 Score = 84.2 bits (92), Expect = 1e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 15284 TTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGA 15343 |||||| |||||||||| || || |||||| ||||| || |||||||| || |||| | Sbjct 517 TTTACATTTTCTATGGTGTCACTGGGTTCTACTTCTAAAGTTATGGTTTTGCCAGTCAAA 576 Query 15344 GTTTTTACAAAAATTTGCATA 15364 || ||||||||||| |||||| Sbjct 577 GTCTTTACAAAAATCTGCATA 597 >seq2535487 Length=251 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 15254 GGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 ||||||||||| || || || ||| |||||| | ||||| || || || |||| Sbjct 240 GGAATTCCTTCCTTATCCTGGATCTTGGCTTTTACATTCTCTATTGTGTCACTGGGTTCT 181 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || |||||||| || |||| ||| ||||||||||| ||||| Sbjct 180 ACTTCTAAAGTTATGGTTTTGCCAGTCAAAGTCTTTACAAAAATCTGCAT 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340168163742075