Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1187548 118 6e-22 seq21712 104 1e-17 seq215054 84.2 1e-11 >seq1187548 Length=1734 Score = 118 bits (130), Expect = 6e-22 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||||||||| || ||||||||||| ||||| ||||||||||| || || || ||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 || || |||||| ||| || | | || || || | ||| ||||||||||| || | Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 33281 ATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 ||| ||| || || ||| ||| ||||| | |||| || || |||||||| ||| Sbjct 1604 ATCTTAGCC---TTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTT 1548 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || || || ||||| Sbjct 1547 TTACCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 Score = 100 bits (110), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||||||||| || ||||||||||| ||||| ||||||||||| || || || ||| Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277 || || || ||| ||| || | | || ||||| | || || |||||||| || | Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || ||| || ||||| | |||| || || || || || || Sbjct 473 ATTTTAGCC---TTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTC 417 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTA 33374 || || || || ||||| || || ||||||||| ||| Sbjct 416 TTGCCAGTGAGTGTTTTAACAAAGATTTGCATGGTTA 380 >seq21712 Length=99785 Score = 104 bits (114), Expect = 1e-17 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG--TCATCCAATTGCTTTCCACTAA 33236 ||||| || |||||||||||||| | ||| || | ||||| ||||||||| || Sbjct 91261 TCTTTCTGAATATTGTAATCAGAGAG--TGATCTGCCATTTTCCAACTGCTTTCCAGCAA 91204 Query 33237 ATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGT-TTTACT 33295 | | | ||||||||| || | || |||||||||||||| ||| ||| || || Sbjct 91203 AACTGAGACGTTGCTGATCAGGTGGAATGCCTTCTTTTTCTTGAAT-TTTTGTCTTCACG 91145 Query 33296 GTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTT 33355 ||| ||| ||||| |||||| ||| |||| ||| || ||||| || ||| | ||||| Sbjct 91144 TTTTCAATAGTGTCACTGGGTTCAACTTCCAAAGTAATGGTTTTACCTGTAGGGGTTTTG 91085 Query 33356 ACGAAAATTTGCAT 33369 ||||| || ||||| Sbjct 91084 ACGAAGATCTGCAT 91071 >seq215054 Length=1089 Score = 84.2 bits (92), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| |||||||| ||| || | |||||||||||| | ||||| |||||||| Sbjct 216 TCTTCCAACTGCTTTCCTGCAAAAATCAGACGTTGCTGGTCTGGCGGTATACCTTCTTTA 275 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || ||| ||| || || ||| ||| ||||| |||| | || ||||| ||| Sbjct 276 TCCTGTATCTTGGCC---TTGACATTTTCAATGGTGTCACTGGGCTCCACTTCCAGGGTT 332 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || |||||||| || ||||| Sbjct 333 ATGGTCTTGCCAGTCAGGGTCTTTACGAAGATCTGCAT 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299404247494350