Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1187548 93.3 3e-14 seq197271 82.4 5e-11 >seq1187548 Length=1734 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| | ||| ||||||||||||||||||||| || || |||| ||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 || |||||||| ||||| |||| | || || || | || | ||||||||||| | Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || || || | ||| || || || ||||| || | || ||||||||| Sbjct 1604 ATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTA 1545 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | ||||||||||| || ||||| Sbjct 1544 CCAGTCAGTGTCTTCACAAAGATCTGCAT 1516 >seq197271 Length=6114 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||||| ||| | || | ||| || || ||||| |||||||| ||||| Sbjct 1587 CCTCCTCTCAGTCTGAGGACAAGATGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAG 1528 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | |||| ||||| |||||||||||||| || | |||||||| || | || Sbjct 1527 AGTGTTCTGCCATCTTCCAACTGTTTTCCTGCAAAAATGAGACGTTGCTGATCAGGTGGA 1468 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||||||||| ||||||| || || | | | ||| || || || || Sbjct 1467 ATGCCTTCTTTATCTTGAATTTTTGCCTTCACGTTTTCTATAGTGTCACTGGGTTCAACT 1408 Query 44075 TCGACCGTAATTGTTTTACC 44094 || | ||||| |||||||| Sbjct 1407 TCCAAAGTAATGGTTTTACC 1388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333216387713100