Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq215054 120 2e-22 seq3343411 93.3 3e-14 seq1187548 82.4 6e-11 >seq215054 Length=1089 Score = 120 bits (132), Expect = 2e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 19985 CCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATA 20044 || ||||||||||| |||| ||| ||||| ||||| ||||| ||||| || || | Sbjct 615 CCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAGAGG 674 Query 20045 GTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACG 20104 || ||| || | |||||||||||| | ||||||||||||||||| ||| | | Sbjct 675 GTACGTCCATCCTCTAGCTGTTTGCCCGCAAATATAAGCCTCTGTTGATCAGGGGGAATG 734 Query 20105 CCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCC 20164 |||||||| || ||||| ||| || | ||| | || | ||||||| ||| Sbjct 735 CCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCAATTGTGTCACTAGGTTCCACTTCA 794 Query 20165 ACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | |||||| || ||||| ||||| || || ||||| || ||||| Sbjct 795 AGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 838 >seq3343411 Length=310 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||||||||| |||| ||| ||||| ||||| ||||| ||||| || || Sbjct 92 CCACCACGTAACCTCAAGACCAGATGAAGTGTTGATTCCTTTTGGATGTTATAGTCTGAG 151 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || ||| || | |||||||| ||| | ||||||||||| ||||| ||| Sbjct 152 AGGGTGCGTCCATCCTCTAGCTGTTTGCCTGCAAATATAAGCCTCTGCTGATCTGGGGGA 211 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||| || ||||| ||| || | | | | || | ||||||| | Sbjct 212 ATGCCTTCTTTATCTTGGATTTTAGCTTTTACATTTTCTATCGTGTCACTAGGTTCCACT 271 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 || | ||||||||| || || || | || || |||||| Sbjct 272 TCAAGGGTAATGGTCTTACCAGTTAGAGTCTTCACAAAA 310 >seq1187548 Length=1734 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| | || || |||||||| || || ||||| || || ||||||| Sbjct 593 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 534 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 || |||||||| ||| |||| ||||||||||| || || | |||||||| || Sbjct 533 AACTGTTTGCCAGCAAAAATCAGCCTCTGTTGGTCAGGTGGAATTCCTTCTTTATCCTGG 474 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| ||||| | | | | || | |||||| || | || ||||| ||| Sbjct 473 ATTTTAGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACCTCAAGTGTGATGGTCTTG 414 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACT 20217 || || | ||||| ||||| |||||||| |||| || Sbjct 413 CCAGTGAGTGTTTTAACAAAGATTTGCATGGTTAACCT 376 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| | || || |||||||| || || ||||| || || ||||||| Sbjct 1724 ACCAAATGCAAAGTGGACTCTTTTTGAATATTATAATCAGACAAGGTGCGTCCATCTTCC 1665 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 || ||||| || ||| | || || ||||||||||| ||| | ||||||||| || | Sbjct 1664 AACTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGGGGAATGCCTTCTTTATCCTGA 1605 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || ||||| | ||| | || | |||||| ||| | || || ||||| Sbjct 1604 ATCTTAGCCTTCACATTTTCAATTGTGTCACTTGGTTCCACTTCAAGAGTTATTGTTTTA 1545 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || |||| || || ||||| || |||||| Sbjct 1544 CCAGTCAGTGTCTTCACAAAGATCTGCATT 1515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394087256677575